Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.4□□□□□ -1.38
SgcdP82347 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SgcdP82347 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
SgcdP82347 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
SgcdP82347 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SgcdP82347 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SgcdP82347 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SgcdP82347 Gm26146-201ENSMUST00000104478 185 ntBASIC6.4□□□□□ -1.38
SgcdP82347 Gm12535-201ENSMUST00000121025 484 ntBASIC6.4□□□□□ -1.38
SgcdP82347 Gm24893-201ENSMUST00000122745 369 ntBASIC6.4□□□□□ -1.38
SgcdP82347 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SgcdP82347 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC6.4□□□□□ -1.38
SgcdP82347 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC6.4□□□□□ -1.38
SgcdP82347 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC6.4□□□□□ -1.38
SgcdP82347 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC6.4□□□□□ -1.38
SgcdP82347 Gm8919-201ENSMUST00000182028 1014 ntBASIC6.4□□□□□ -1.38
SgcdP82347 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.38
SgcdP82347 Gm7436-201ENSMUST00000187229 391 ntBASIC6.4□□□□□ -1.38
SgcdP82347 Gm28923-201ENSMUST00000187755 322 ntBASIC6.4□□□□□ -1.38
SgcdP82347 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.4□□□□□ -1.38
SgcdP82347 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SgcdP82347 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC6.4□□□□□ -1.38
SgcdP82347 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.4□□□□□ -1.38
SgcdP82347 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.4□□□□□ -1.38
SgcdP82347 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC6.4□□□□□ -1.38
SgcdP82347 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.4□□□□□ -1.38
SgcdP82347 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.4□□□□□ -1.38
SgcdP82347 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SgcdP82347 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SgcdP82347 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SgcdP82347 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SgcdP82347 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
SgcdP82347 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SgcdP82347 Gm7265-201ENSMUST00000192735 3502 ntBASIC6.4□□□□□ -1.39
SgcdP82347 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SgcdP82347 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.4□□□□□ -1.39
SgcdP82347 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
SgcdP82347 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.4□□□□□ -1.39
SgcdP82347 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
SgcdP82347 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
SgcdP82347 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SgcdP82347 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SgcdP82347 Gm42595-201ENSMUST00000196771 1607 ntBASIC6.39□□□□□ -1.39
SgcdP82347 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcdP82347 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcdP82347 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcdP82347 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SgcdP82347 AC123705.1-201ENSMUST00000222512 2058 ntBASIC6.39□□□□□ -1.39
SgcdP82347 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
SgcdP82347 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SgcdP82347 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SgcdP82347 Gm23701-201ENSMUST00000103893 110 ntBASIC6.39□□□□□ -1.39
SgcdP82347 Mir1907-201ENSMUST00000122509 90 ntBASIC6.39□□□□□ -1.39
SgcdP82347 Gm25180-201ENSMUST00000157746 115 ntBASIC6.39□□□□□ -1.39
SgcdP82347 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcdP82347 Gm17973-201ENSMUST00000174509 520 ntBASIC6.39□□□□□ -1.39
SgcdP82347 Gm22569-201ENSMUST00000175545 124 ntBASIC6.39□□□□□ -1.39
SgcdP82347 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcdP82347 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcdP82347 Gm27218-201ENSMUST00000183745 392 ntBASIC6.39□□□□□ -1.39
SgcdP82347 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC6.39□□□□□ -1.39
SgcdP82347 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC6.39□□□□□ -1.39
SgcdP82347 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC6.39□□□□□ -1.39
SgcdP82347 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SgcdP82347 Gm18562-201ENSMUST00000209949 915 ntBASIC6.39□□□□□ -1.39
SgcdP82347 Gm45739-201ENSMUST00000213094 388 ntBASIC6.39□□□□□ -1.39
SgcdP82347 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC6.39□□□□□ -1.39
SgcdP82347 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.39□□□□□ -1.39
SgcdP82347 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.39□□□□□ -1.39
SgcdP82347 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcdP82347 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcdP82347 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.39□□□□□ -1.39
SgcdP82347 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SgcdP82347 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcdP82347 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcdP82347 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SgcdP82347 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
SgcdP82347 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
SgcdP82347 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcdP82347 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SgcdP82347 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SgcdP82347 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SgcdP82347 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SgcdP82347 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcdP82347 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcdP82347 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SgcdP82347 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SgcdP82347 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcdP82347 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcdP82347 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
SgcdP82347 Gm25631-201ENSMUST00000104390 130 ntBASIC6.38□□□□□ -1.39
SgcdP82347 Gm6754-201ENSMUST00000117124 913 ntBASIC6.38□□□□□ -1.39
SgcdP82347 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SgcdP82347 Gm12677-201ENSMUST00000118668 426 ntBASIC6.38□□□□□ -1.39
SgcdP82347 Gm5759-201ENSMUST00000119203 811 ntBASIC6.38□□□□□ -1.39
SgcdP82347 Gm14485-201ENSMUST00000119489 493 ntBASIC6.38□□□□□ -1.39
SgcdP82347 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SgcdP82347 Gm22275-201ENSMUST00000122470 310 ntBASIC6.38□□□□□ -1.39
SgcdP82347 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC6.38□□□□□ -1.39
SgcdP82347 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms