Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC6.58□□□□□ -1.36
Sox3P53784 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox3P53784 Gm6990-201ENSMUST00000086830 348 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox3P53784 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Sox3P53784 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox3P53784 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox3P53784 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC6.58□□□□□ -1.36
Sox3P53784 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox3P53784 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.58□□□□□ -1.36
Sox3P53784 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.58□□□□□ -1.36
Sox3P53784 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Sox3P53784 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Sox3P53784 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox3P53784 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Sox3P53784 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sox3P53784 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sox3P53784 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Sox3P53784 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox3P53784 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox3P53784 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox3P53784 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Sox3P53784 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox3P53784 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox3P53784 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox3P53784 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox3P53784 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Sox3P53784 Gm22267-201ENSMUST00000104008 131 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Gm25498-201ENSMUST00000104424 129 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Gm15081-201ENSMUST00000119794 844 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Gm12152-201ENSMUST00000122465 684 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Gm23225-201ENSMUST00000158121 114 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Gm16557-201ENSMUST00000159182 191 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox3P53784 Mir5112-201ENSMUST00000174897 60 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Sox3P53784 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox3P53784 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox3P53784 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox3P53784 Gm28586-201ENSMUST00000189857 456 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Ighv1-27-201ENSMUST00000194473 340 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Gm44982-201ENSMUST00000208795 471 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Gm45279-201ENSMUST00000210315 391 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox3P53784 Gm5831-201ENSMUST00000216016 1209 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Gm10126-201ENSMUST00000221732 168 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.57□□□□□ -1.36
Sox3P53784 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.57□□□□□ -1.36
Sox3P53784 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.57□□□□□ -1.36
Sox3P53784 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Sox3P53784 Mir106b-201ENSMUST00000083580 82 ntBASIC6.57□□□□□ -1.36
Sox3P53784 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox3P53784 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sox3P53784 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox3P53784 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox3P53784 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox3P53784 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox3P53784 Gm42820-201ENSMUST00000200084 3063 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox3P53784 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox3P53784 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC6.57□□□□□ -1.36
Sox3P53784 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Sox3P53784 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Sox3P53784 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.57□□□□□ -1.36
Sox3P53784 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox3P53784 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Sox3P53784 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Sox3P53784 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Sox3P53784 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Sox3P53784 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.56□□□□□ -1.36
Sox3P53784 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.56□□□□□ -1.36
Sox3P53784 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sox3P53784 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sox3P53784 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Sox3P53784 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sox3P53784 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Sox3P53784 Gm25785-201ENSMUST00000104129 125 ntBASIC6.56□□□□□ -1.36
Sox3P53784 Gm23485-201ENSMUST00000104181 155 ntBASIC6.56□□□□□ -1.36
Sox3P53784 Gm9506-201ENSMUST00000118516 320 ntBASIC6.56□□□□□ -1.36
Sox3P53784 Gm6382-201ENSMUST00000118873 942 ntBASIC6.56□□□□□ -1.36
Sox3P53784 Gm5255-201ENSMUST00000120125 642 ntBASIC6.56□□□□□ -1.36
Sox3P53784 Gm15096-201ENSMUST00000121918 878 ntBASIC6.56□□□□□ -1.36
Sox3P53784 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sox3P53784 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.56□□□□□ -1.36
Sox3P53784 Trav8-2-201ENSMUST00000130122 337 ntBASIC6.56□□□□□ -1.36
Sox3P53784 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sox3P53784 Gm23740-201ENSMUST00000157385 100 ntBASIC6.56□□□□□ -1.36
Sox3P53784 Gm24687-201ENSMUST00000157758 241 ntBASIC6.56□□□□□ -1.36
Sox3P53784 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.56□□□□□ -1.36
Sox3P53784 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sox3P53784 Mir199b-201ENSMUST00000175066 110 ntBASIC6.56□□□□□ -1.36
Sox3P53784 Gm27849-201ENSMUST00000183673 125 ntBASIC6.56□□□□□ -1.36
Sox3P53784 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms