Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 1700024J04Rik-201ENSMUST00000093146 1821 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
Sox1P53783 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC7.7□□□□□ -1.18
Sox1P53783 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Sox1P53783 Olfr1426-206ENSMUST00000219996 2436 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Sox1P53783 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 Gm28497-201ENSMUST00000189646 3029 ntBASIC7.7□□□□□ -1.18
Sox1P53783 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Sox1P53783 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Sox1P53783 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sox1P53783 Cd200r4-201ENSMUST00000114626 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sox1P53783 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sox1P53783 Zfp677-202ENSMUST00000162659 2917 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sox1P53783 Gm28906-201ENSMUST00000191371 1779 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Zfp800-201ENSMUST00000035930 3881 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sox1P53783 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sox1P53783 Dubr-205ENSMUST00000191079 2105 ntTSL 2 BASIC7.69□□□□□ -1.18
Sox1P53783 Gm3147-202ENSMUST00000201071 1848 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sox1P53783 A430089I19Rik-201ENSMUST00000097479 1848 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sox1P53783 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC7.69□□□□□ -1.18
Sox1P53783 Hnrnph2-204ENSMUST00000113202 3988 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Sox1P53783 AC138284.3-201ENSMUST00000217345 4663 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Sox1P53783 Gm4991-201ENSMUST00000118899 1552 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Gm13118-201ENSMUST00000120402 549 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Gm5166-201ENSMUST00000121332 573 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Gm12778-201ENSMUST00000122341 333 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Gm23046-201ENSMUST00000158369 284 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Gm24545-201ENSMUST00000158651 85 ntBASIC7.69□□□□□ -1.18
Sox1P53783 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Sox1P53783 Gm17022-201ENSMUST00000166415 922 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Samd15-201ENSMUST00000169669 1194 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Gm27854-201ENSMUST00000175578 244 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
Sox1P53783 Gm5445-201ENSMUST00000180224 480 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Sox1P53783 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Gm5334-201ENSMUST00000187472 720 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Gm36939-201ENSMUST00000194889 439 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC7.69□□□□□ -1.18
Sox1P53783 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC7.69□□□□□ -1.18
Sox1P53783 Gm43945-201ENSMUST00000203595 754 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Gm18645-201ENSMUST00000209593 651 ntBASIC7.69□□□□□ -1.18
Sox1P53783 AC153847.1-201ENSMUST00000214524 353 ntBASIC7.69□□□□□ -1.18
Sox1P53783 AC126685.1-201ENSMUST00000221001 121 ntBASIC7.69□□□□□ -1.18
Sox1P53783 AC125523.1-201ENSMUST00000228018 934 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Olfr449-201ENSMUST00000050729 1037 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Sox1P53783 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Sox1P53783 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Sox1P53783 Gm23734-201ENSMUST00000083753 109 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sox1P53783 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Sox1P53783 Olfr1143-201ENSMUST00000090708 945 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Sox1P53783 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Sox1P53783 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sox1P53783 Gm12667-201ENSMUST00000118299 1332 ntBASIC7.69□□□□□ -1.18
Sox1P53783 Flrt3-201ENSMUST00000056760 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sox1P53783 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sox1P53783 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC7.69□□□□□ -1.18
Sox1P53783 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Sox1P53783 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC7.69□□□□□ -1.18
Sox1P53783 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC7.69□□□□□ -1.18
Sox1P53783 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC7.68□□□□□ -1.18
Sox1P53783 Gm37829-201ENSMUST00000193864 2213 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Gm18537-202ENSMUST00000206215 1503 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Nek10-202ENSMUST00000112630 3348 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Sox1P53783 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Sox1P53783 Gm11271-201ENSMUST00000116054 440 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm12225-201ENSMUST00000117995 298 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm13501-201ENSMUST00000118477 979 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm13902-201ENSMUST00000120168 605 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm15488-201ENSMUST00000121682 670 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm4886-201ENSMUST00000121874 1176 ntBASIC7.68□□□□□ -1.18
Sox1P53783 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC7.68□□□□□ -1.18
Sox1P53783 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC7.68□□□□□ -1.18
Sox1P53783 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC7.68□□□□□ -1.18
Sox1P53783 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC7.68□□□□□ -1.18
Sox1P53783 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC7.68□□□□□ -1.18
Sox1P53783 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms