Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Cdx2P43241 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.52□□□□□ -1.37
Cdx2P43241 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC6.52□□□□□ -1.37
Cdx2P43241 Gm27653-201ENSMUST00000185037 136 ntBASIC6.52□□□□□ -1.37
Cdx2P43241 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.52□□□□□ -1.37
Cdx2P43241 Gm43116-201ENSMUST00000199789 195 ntBASIC6.52□□□□□ -1.37
Cdx2P43241 Gm20223-201ENSMUST00000199932 805 ntBASIC6.52□□□□□ -1.37
Cdx2P43241 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cdx2P43241 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC6.52□□□□□ -1.37
Cdx2P43241 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.52□□□□□ -1.37
Cdx2P43241 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.52□□□□□ -1.37
Cdx2P43241 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.52□□□□□ -1.37
Cdx2P43241 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.52□□□□□ -1.37
Cdx2P43241 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC6.52□□□□□ -1.37
Cdx2P43241 Gm17849-201ENSMUST00000219788 853 ntBASIC6.52□□□□□ -1.37
Cdx2P43241 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.52□□□□□ -1.37
Cdx2P43241 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.52□□□□□ -1.37
Cdx2P43241 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Cdx2P43241 Gm10205-201ENSMUST00000087431 234 ntBASIC6.52□□□□□ -1.37
Cdx2P43241 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cdx2P43241 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cdx2P43241 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Cdx2P43241 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cdx2P43241 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cdx2P43241 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cdx2P43241 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cdx2P43241 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cdx2P43241 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cdx2P43241 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cdx2P43241 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Cdx2P43241 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Cdx2P43241 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Cdx2P43241 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx2P43241 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Cdx2P43241 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx2P43241 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx2P43241 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx2P43241 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx2P43241 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx2P43241 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Cdx2P43241 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Cdx2P43241 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx2P43241 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.51□□□□□ -1.37
Cdx2P43241 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx2P43241 Gm5319-201ENSMUST00000118965 873 ntBASIC6.51□□□□□ -1.37
Cdx2P43241 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx2P43241 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.51□□□□□ -1.37
Cdx2P43241 Gm8837-201ENSMUST00000161037 1107 ntBASIC6.51□□□□□ -1.37
Cdx2P43241 Gm26557-201ENSMUST00000180756 493 ntBASIC6.51□□□□□ -1.37
Cdx2P43241 Gm26509-201ENSMUST00000180947 948 ntBASIC6.51□□□□□ -1.37
Cdx2P43241 Gm28620-201ENSMUST00000190463 439 ntBASIC6.51□□□□□ -1.37
Cdx2P43241 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.51□□□□□ -1.37
Cdx2P43241 Gm7166-201ENSMUST00000199715 303 ntBASIC6.51□□□□□ -1.37
Cdx2P43241 Gm7463-201ENSMUST00000201541 547 ntBASIC6.51□□□□□ -1.37
Cdx2P43241 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.51□□□□□ -1.37
Cdx2P43241 Gm5831-201ENSMUST00000216016 1209 ntBASIC6.51□□□□□ -1.37
Cdx2P43241 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
Cdx2P43241 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.51□□□□□ -1.37
Cdx2P43241 AC156790.1-201ENSMUST00000226572 559 ntBASIC6.51□□□□□ -1.37
Cdx2P43241 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.51□□□□□ -1.37
Cdx2P43241 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx2P43241 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC6.51□□□□□ -1.37
Cdx2P43241 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Cdx2P43241 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Cdx2P43241 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx2P43241 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx2P43241 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx2P43241 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Cdx2P43241 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Cdx2P43241 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdx2P43241 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Cdx2P43241 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
Cdx2P43241 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdx2P43241 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cdx2P43241 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cdx2P43241 Rnu11-201ENSMUST00000104135 134 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 Gm11821-201ENSMUST00000117335 979 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 Gm8250-201ENSMUST00000117398 774 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 Gm11256-201ENSMUST00000118109 829 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 Gm12438-201ENSMUST00000122034 336 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 Gm3810-201ENSMUST00000122413 476 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 Gm23426-201ENSMUST00000122483 318 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cdx2P43241 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdx2P43241 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Cdx2P43241 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdx2P43241 Gm7266-201ENSMUST00000187999 405 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 Gm28413-201ENSMUST00000189369 291 ntBASIC6.5□□□□□ -1.37
Cdx2P43241 Gm18849-201ENSMUST00000189861 560 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms