Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm11796-201ENSMUST00000120208 972 ntBASIC7.99□□□□□ -1.13
Traf1P39428 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
Traf1P39428 Gm6451-201ENSMUST00000121488 717 ntBASIC7.99□□□□□ -1.13
Traf1P39428 Gm12754-201ENSMUST00000121908 454 ntBASIC7.99□□□□□ -1.13
Traf1P39428 Gm14847-201ENSMUST00000121978 519 ntBASIC7.99□□□□□ -1.13
Traf1P39428 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.99□□□□□ -1.13
Traf1P39428 Gm16298-201ENSMUST00000161107 420 ntBASIC7.99□□□□□ -1.13
Traf1P39428 Gm7289-201ENSMUST00000168993 734 ntBASIC7.99□□□□□ -1.13
Traf1P39428 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.99□□□□□ -1.13
Traf1P39428 Gm37328-201ENSMUST00000193191 640 ntBASIC7.99□□□□□ -1.13
Traf1P39428 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.99□□□□□ -1.13
Traf1P39428 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.99□□□□□ -1.13
Traf1P39428 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Traf1P39428 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC7.99□□□□□ -1.13
Traf1P39428 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.99□□□□□ -1.13
Traf1P39428 AC124489.3-201ENSMUST00000224037 278 ntBASIC7.99□□□□□ -1.13
Traf1P39428 CT009495.1-201ENSMUST00000224221 862 ntBASIC7.99□□□□□ -1.13
Traf1P39428 AC154646.1-201ENSMUST00000225011 1092 ntBASIC7.99□□□□□ -1.13
Traf1P39428 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.99□□□□□ -1.13
Traf1P39428 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.99□□□□□ -1.13
Traf1P39428 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Traf1P39428 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Traf1P39428 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
Traf1P39428 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Traf1P39428 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Traf1P39428 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Traf1P39428 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Traf1P39428 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC7.99□□□□□ -1.13
Traf1P39428 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Traf1P39428 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Traf1P39428 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Traf1P39428 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Traf1P39428 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Traf1P39428 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.99□□□□□ -1.13
Traf1P39428 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Traf1P39428 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Traf1P39428 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC7.99□□□□□ -1.13
Traf1P39428 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
Traf1P39428 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Traf1P39428 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Traf1P39428 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Traf1P39428 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Traf1P39428 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Traf1P39428 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.98□□□□□ -1.13
Traf1P39428 CT010470.1-201ENSMUST00000225364 1876 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Traf1P39428 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Traf1P39428 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
Traf1P39428 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Traf1P39428 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Traf1P39428 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Traf1P39428 Gm12468-201ENSMUST00000116189 404 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Snord88a-201ENSMUST00000116723 90 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Gm12573-201ENSMUST00000118158 286 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Gm11485-201ENSMUST00000120048 1175 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Gm4992-201ENSMUST00000120256 768 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Gm14070-201ENSMUST00000120773 428 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Gm4886-201ENSMUST00000121874 1176 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Gm12778-201ENSMUST00000122341 333 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Traf1P39428 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC7.98□□□□□ -1.13
Traf1P39428 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC7.98□□□□□ -1.13
Traf1P39428 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Traf1P39428 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Traf1P39428 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC7.98□□□□□ -1.13
Traf1P39428 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Traf1P39428 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.98□□□□□ -1.13
Traf1P39428 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Traf1P39428 Gm9359-201ENSMUST00000163721 1221 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Gm4202-201ENSMUST00000169025 733 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC7.98□□□□□ -1.13
Traf1P39428 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC7.98□□□□□ -1.13
Traf1P39428 Gm17895-201ENSMUST00000194028 874 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Ighv8-3-201ENSMUST00000194985 295 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC7.98□□□□□ -1.13
Traf1P39428 Gm23011-202ENSMUST00000197855 275 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Traf1P39428 Gm43849-201ENSMUST00000201086 215 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
Traf1P39428 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.98□□□□□ -1.13
Traf1P39428 AC123917.1-201ENSMUST00000228063 1048 ntBASIC7.98□□□□□ -1.13
Traf1P39428 AW822073-201ENSMUST00000075305 555 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Traf1P39428 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Traf1P39428 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Traf1P39428 Gm8276-201ENSMUST00000192231 1812 ntBASIC7.98□□□□□ -1.13
Traf1P39428 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Traf1P39428 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Traf1P39428 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Traf1P39428 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
Traf1P39428 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Traf1P39428 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Traf1P39428 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC7.97□□□□□ -1.13
Traf1P39428 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Traf1P39428 Gm3608-201ENSMUST00000086725 2858 ntBASIC7.97□□□□□ -1.13
Traf1P39428 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Traf1P39428 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Traf1P39428 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms