Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 AC131743.3-201ENSMUST00000222099 662 ntBASIC8.93□□□□□ -0.98
Col18a1P39061 AC105950.1-201ENSMUST00000222637 408 ntBASIC8.93□□□□□ -0.98
Col18a1P39061 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Col18a1P39061 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC8.93□□□□□ -0.98
Col18a1P39061 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC8.93□□□□□ -0.98
Col18a1P39061 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Gm36933-201ENSMUST00000194945 3071 ntBASIC8.93□□□□□ -0.98
Col18a1P39061 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Col18a1P39061 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Plcd4-202ENSMUST00000067916 4552 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Col18a1P39061 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 Gm7205-201ENSMUST00000196032 1323 ntBASIC8.92□□□□□ -0.98
Col18a1P39061 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC8.92□□□□□ -0.98
Col18a1P39061 Gm22106-201ENSMUST00000122544 127 ntBASIC8.92□□□□□ -0.98
Col18a1P39061 Gm8988-201ENSMUST00000155015 1240 ntBASIC8.92□□□□□ -0.98
Col18a1P39061 Gm22820-201ENSMUST00000157205 329 ntBASIC8.92□□□□□ -0.98
Col18a1P39061 Gm23995-201ENSMUST00000158060 129 ntBASIC8.92□□□□□ -0.98
Col18a1P39061 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Col18a1P39061 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 Gm44554-201ENSMUST00000208738 147 ntBASIC8.92□□□□□ -0.98
Col18a1P39061 Gm46379-201ENSMUST00000222551 265 ntBASIC8.92□□□□□ -0.98
Col18a1P39061 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC8.92□□□□□ -0.98
Col18a1P39061 Gm24525-201ENSMUST00000082917 151 ntBASIC8.92□□□□□ -0.98
Col18a1P39061 Btk-202ENSMUST00000113213 2121 ntTSL 5 BASIC8.92□□□□□ -0.98
Col18a1P39061 Plekha2-201ENSMUST00000064883 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Col18a1P39061 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC8.92□□□□□ -0.98
Col18a1P39061 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 Gm43719-201ENSMUST00000200088 2199 ntBASIC8.92□□□□□ -0.98
Col18a1P39061 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC8.92□□□□□ -0.98
Col18a1P39061 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Col18a1P39061 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Col18a1P39061 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 Pde10a-211ENSMUST00000149440 4897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col18a1P39061 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Col18a1P39061 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Mir466f-4-201ENSMUST00000116930 121 ntBASIC8.91□□□□□ -0.98
Col18a1P39061 Gm5073-201ENSMUST00000118222 820 ntBASIC8.91□□□□□ -0.98
Col18a1P39061 Gm16057-201ENSMUST00000120811 759 ntBASIC8.91□□□□□ -0.98
Col18a1P39061 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC8.91□□□□□ -0.98
Col18a1P39061 Gm23740-201ENSMUST00000157385 100 ntBASIC8.91□□□□□ -0.98
Col18a1P39061 Gm23669-201ENSMUST00000157470 128 ntBASIC8.91□□□□□ -0.98
Col18a1P39061 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Col18a1P39061 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC8.91□□□□□ -0.98
Col18a1P39061 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC8.91□□□□□ -0.98
Col18a1P39061 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Col18a1P39061 AC131795.1-201ENSMUST00000219632 426 ntBASIC8.91□□□□□ -0.98
Col18a1P39061 AC154441.1-201ENSMUST00000223653 1006 ntBASIC8.91□□□□□ -0.98
Col18a1P39061 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Col18a1P39061 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Col18a1P39061 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Col18a1P39061 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Col18a1P39061 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Col18a1P39061 Tcaim-201ENSMUST00000052740 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Col18a1P39061 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Col18a1P39061 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Col18a1P39061 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC8.91□□□□□ -0.98
Col18a1P39061 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
Col18a1P39061 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Col18a1P39061 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Col18a1P39061 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC8.91□□□□□ -0.98
Col18a1P39061 Gm12193-201ENSMUST00000117250 379 ntBASIC8.91□□□□□ -0.98
Col18a1P39061 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms