Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx1P18111 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cdx1P18111 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx1P18111 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC5.58□□□□□ -1.52
Cdx1P18111 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cdx1P18111 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx1P18111 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cdx1P18111 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cdx1P18111 Gm22470-201ENSMUST00000104117 130 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 n-R5s72-201ENSMUST00000104518 119 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx1P18111 Mir669e-201ENSMUST00000117003 119 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 Gm14480-201ENSMUST00000118521 433 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx1P18111 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx1P18111 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx1P18111 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx1P18111 Gm24300-201ENSMUST00000177809 109 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 Gm24017-201ENSMUST00000178726 109 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 Gm23952-201ENSMUST00000179380 109 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.58□□□□□ -1.52
Cdx1P18111 Gm9423-201ENSMUST00000183173 997 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx1P18111 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.58□□□□□ -1.52
Cdx1P18111 Gm28142-201ENSMUST00000186899 698 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx1P18111 Gm37491-201ENSMUST00000192552 1111 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 Gm27680-202ENSMUST00000199221 807 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 Gm43243-201ENSMUST00000199964 278 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 Gm43558-201ENSMUST00000200155 210 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx1P18111 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC5.58□□□□□ -1.52
Cdx1P18111 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx1P18111 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx1P18111 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx1P18111 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx1P18111 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Cdx1P18111 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.58□□□□□ -1.52
Cdx1P18111 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cdx1P18111 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx1P18111 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cdx1P18111 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Cdx1P18111 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Cdx1P18111 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx1P18111 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cdx1P18111 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Cdx1P18111 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC5.57□□□□□ -1.52
Cdx1P18111 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.57□□□□□ -1.52
Cdx1P18111 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC5.57□□□□□ -1.52
Cdx1P18111 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Cdx1P18111 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
Cdx1P18111 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
Cdx1P18111 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Gm43623-201ENSMUST00000199289 2663 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cdx1P18111 Gm13416-201ENSMUST00000117264 1612 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.57□□□□□ -1.52
Cdx1P18111 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Cdx1P18111 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Cdx1P18111 Gm21781-201ENSMUST00000178920 4838 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Serpina3h-202ENSMUST00000116393 1226 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Gm12024-201ENSMUST00000118819 1253 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Gm14824-201ENSMUST00000119421 737 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Gm11895-201ENSMUST00000122165 467 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Gm25178-201ENSMUST00000122633 325 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Gm14457-201ENSMUST00000148069 1161 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC5.57□□□□□ -1.52
Cdx1P18111 Gm22604-201ENSMUST00000157604 311 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Gm24530-201ENSMUST00000157948 288 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Gm22206-201ENSMUST00000158612 116 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Gm22262-201ENSMUST00000158713 86 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Gm27762-201ENSMUST00000183417 109 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Mir6769b-201ENSMUST00000184793 60 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Mir6403-201ENSMUST00000185007 129 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC5.57□□□□□ -1.52
Cdx1P18111 Gm28117-201ENSMUST00000188472 371 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Gm43542-201ENSMUST00000199505 379 ntBASIC5.57□□□□□ -1.52
Cdx1P18111 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC5.57□□□□□ -1.52
Cdx1P18111 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Cdx1P18111 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC5.57□□□□□ -1.52
Cdx1P18111 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC5.57□□□□□ -1.52
Cdx1P18111 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms