Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm13525-201ENSMUST00000120607 478 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Gm12181-201ENSMUST00000121448 531 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Gm23116-201ENSMUST00000158481 67 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Gm28413-201ENSMUST00000189369 291 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Gm29288-201ENSMUST00000191582 901 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Trdv3-201ENSMUST00000198551 309 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Gm3511-201ENSMUST00000199823 204 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Gm44412-201ENSMUST00000203018 294 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Gm44694-201ENSMUST00000205317 1298 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Gm45701-201ENSMUST00000212049 235 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Gm46231-201ENSMUST00000220152 314 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 AC159293.2-201ENSMUST00000222289 424 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 AC139209.2-201ENSMUST00000227680 1208 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.23□□□□□ -1.41
H2afb3S4R1G7 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm43775-201ENSMUST00000201019 3395 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Mir697-201ENSMUST00000102316 109 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm22439-201ENSMUST00000104048 132 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm15048-201ENSMUST00000118201 954 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm14485-201ENSMUST00000119489 493 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm11383-201ENSMUST00000121346 807 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm12321-201ENSMUST00000121485 804 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm8089-201ENSMUST00000122463 968 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm24111-201ENSMUST00000175491 97 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm8641-201ENSMUST00000186995 826 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm3489-201ENSMUST00000190083 528 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm37585-201ENSMUST00000195440 280 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm44111-201ENSMUST00000204649 399 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm30196-201ENSMUST00000208957 160 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 AC118006.3-201ENSMUST00000223948 1176 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 A1cf-203ENSMUST00000224400 1204 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 AC154527.3-201ENSMUST00000225519 989 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Snora9-201ENSMUST00000082579 133 ntBASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb3S4R1G7 Gm19801-201ENSMUST00000218231 1882 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms