Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm25717-201ENSMUST00000158631 353 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm7420-201ENSMUST00000162836 842 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm7502-201ENSMUST00000169235 733 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm7393-201ENSMUST00000172650 739 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm28894-201ENSMUST00000185214 615 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm28801-201ENSMUST00000188761 449 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm28443-201ENSMUST00000189081 698 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm38373-201ENSMUST00000192042 288 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm37369-201ENSMUST00000194179 615 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm43160-201ENSMUST00000196453 421 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm43595-201ENSMUST00000196464 1071 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm43147-201ENSMUST00000196944 542 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm42573-201ENSMUST00000202327 478 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm24405-201ENSMUST00000083033 167 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 AC164567.3-201ENSMUST00000217743 2869 ntBASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Cdk5rap3Q99LM2 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gm46199-201ENSMUST00000220373 1693 ntBASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gm13222-201ENSMUST00000119638 138 ntBASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gm5135-201ENSMUST00000121100 573 ntBASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gm26183-201ENSMUST00000157685 139 ntBASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gm27507-201ENSMUST00000184199 93 ntBASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gm5305-201ENSMUST00000204010 746 ntBASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gm45100-201ENSMUST00000209153 391 ntBASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gm18781-201ENSMUST00000211252 924 ntBASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gm2774-201ENSMUST00000213650 1165 ntBASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 AC154806.5-205ENSMUST00000228828 411 ntBASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gm23734-201ENSMUST00000083753 109 ntBASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gm4073-201ENSMUST00000176792 3500 ntBASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gm38082-201ENSMUST00000192800 6882 ntBASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gm45360-201ENSMUST00000210698 1405 ntBASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Cdk5rap3Q99LM2 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms