Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Aebp1-201ENSMUST00000102923 3831 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Ptpro-207ENSMUST00000203914 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 AC124426.1-203ENSMUST00000221814 1362 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm17170-201ENSMUST00000112785 316 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm14621-201ENSMUST00000117709 689 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Defa-ps1-201ENSMUST00000119062 282 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm15007-201ENSMUST00000119982 710 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm15019-201ENSMUST00000120148 434 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm12903-201ENSMUST00000121015 544 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Defa-ps6-201ENSMUST00000122172 282 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Mup-ps4-201ENSMUST00000151005 539 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm3102-201ENSMUST00000164236 489 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm17064-201ENSMUST00000167690 452 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm17786-201ENSMUST00000182000 427 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm28639-201ENSMUST00000191519 481 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm7412-201ENSMUST00000191692 605 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm6680-201ENSMUST00000192789 950 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm17967-201ENSMUST00000195319 647 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm43846-201ENSMUST00000200502 932 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm34583-203ENSMUST00000202586 454 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm44138-201ENSMUST00000204939 271 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 CT030166.4-201ENSMUST00000220640 404 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm19238-201ENSMUST00000221936 1260 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 AC108947.1-201ENSMUST00000224274 1000 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 AC161275.1-201ENSMUST00000224668 208 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 AC110176.1-201ENSMUST00000226219 504 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 AC147628.1-201ENSMUST00000228193 688 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm7265-201ENSMUST00000192735 3502 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 AC158686.1-201ENSMUST00000218068 2332 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm42546-201ENSMUST00000201584 2592 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm18537-202ENSMUST00000206215 1503 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm9256-201ENSMUST00000198106 1420 ntBASIC8.03□□□□□ -1.12
Clp1Q99LI9 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC8.02□□□□□ -1.12
Clp1Q99LI9 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Clp1Q99LI9 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
Clp1Q99LI9 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Clp1Q99LI9 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Clp1Q99LI9 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC8.02□□□□□ -1.12
Clp1Q99LI9 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
Clp1Q99LI9 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Clp1Q99LI9 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
Clp1Q99LI9 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Clp1Q99LI9 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Clp1Q99LI9 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Clp1Q99LI9 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Clp1Q99LI9 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Clp1Q99LI9 AC129308.1-201ENSMUST00000223800 2309 ntBASIC8.02□□□□□ -1.13
Clp1Q99LI9 Gng7-204ENSMUST00000118233 3433 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Clp1Q99LI9 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC8.02□□□□□ -1.13
Clp1Q99LI9 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 128.2 ms