Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm18871-201ENSMUST00000218655 745 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 AC147245.1-201ENSMUST00000223294 677 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 AC131710.2-201ENSMUST00000226773 683 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 n-R5s97-201ENSMUST00000082585 113 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm18908-201ENSMUST00000207125 1483 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm13106-201ENSMUST00000119045 1443 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Robo2-210ENSMUST00000226478 8059 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm22774-201ENSMUST00000102084 109 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm25311-201ENSMUST00000104136 132 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm13690-201ENSMUST00000118989 285 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm11581-201ENSMUST00000122024 763 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm10157-201ENSMUST00000139408 343 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm25969-201ENSMUST00000157166 132 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm22035-201ENSMUST00000157284 228 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm4785-201ENSMUST00000191025 751 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm37490-201ENSMUST00000195566 724 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm44705-201ENSMUST00000206719 339 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm18363-201ENSMUST00000221671 730 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Gm23734-201ENSMUST00000083753 109 ntBASIC6.59□□□□□ -1.35
Cstf3Q99LI7 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Cstf3Q99LI7 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Cstf3Q99LI7 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Cstf3Q99LI7 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC6.59□□□□□ -1.36
Cstf3Q99LI7 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Cstf3Q99LI7 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm17184-201ENSMUST00000111864 462 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm11796-201ENSMUST00000120208 972 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm16420-201ENSMUST00000120258 856 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm25722-201ENSMUST00000157498 279 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Gm26183-201ENSMUST00000157685 139 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Mir1930-201ENSMUST00000158799 84 ntBASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC6.58□□□□□ -1.36
Cstf3Q99LI7 Olfr331-202ENSMUST00000170501 957 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms