Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm7113-201ENSMUST00000120477 958 ntBASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm8648-201ENSMUST00000122457 221 ntBASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm22701-201ENSMUST00000175371 291 ntBASIC7.8□□□□□ -1.16
Syne4Q8CII8 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm28527-201ENSMUST00000185210 297 ntBASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Scgb2b33-201ENSMUST00000187413 334 ntBASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm28918-201ENSMUST00000188822 699 ntBASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Igkv12-67-201ENSMUST00000197806 354 ntBASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm43233-201ENSMUST00000200491 616 ntBASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm43850-201ENSMUST00000202021 578 ntBASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm17849-201ENSMUST00000219788 853 ntBASIC7.8□□□□□ -1.16
Syne4Q8CII8 Vmn1r41-202ENSMUST00000226337 888 ntBASIC7.8□□□□□ -1.16
Syne4Q8CII8 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7.8□□□□□ -1.16
Syne4Q8CII8 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm21731-201ENSMUST00000079524 489 ntBASIC7.8□□□□□ -1.16
Syne4Q8CII8 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Syne4Q8CII8 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Syne4Q8CII8 AC154612.1-202ENSMUST00000224806 1725 ntBASIC7.8□□□□□ -1.16
Syne4Q8CII8 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC7.8□□□□□ -1.16
Syne4Q8CII8 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Syne4Q8CII8 Gm42866-201ENSMUST00000195919 3304 ntBASIC7.8□□□□□ -1.16
Syne4Q8CII8 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Syne4Q8CII8 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Syne4Q8CII8 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gm37022-201ENSMUST00000192517 2254 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 Rnu11-201ENSMUST00000104135 134 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC7.79□□□□□ -1.16
Syne4Q8CII8 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gm15502-201ENSMUST00000121449 208 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Syne4Q8CII8 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC7.79□□□□□ -1.16
Syne4Q8CII8 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gm6004-201ENSMUST00000173237 1116 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gm17048-201ENSMUST00000179266 847 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gm28455-201ENSMUST00000189105 1290 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gm18849-201ENSMUST00000189861 560 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gm28620-201ENSMUST00000190463 439 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gm38122-201ENSMUST00000192679 885 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gm38097-201ENSMUST00000192936 439 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gm43689-201ENSMUST00000195951 427 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC7.79□□□□□ -1.16
Syne4Q8CII8 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gm7463-201ENSMUST00000201541 547 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gm7554-201ENSMUST00000202282 574 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gm7499-201ENSMUST00000210423 813 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 AC105407.1-201ENSMUST00000225684 614 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Syne4Q8CII8 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.79□□□□□ -1.16
Syne4Q8CII8 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Syne4Q8CII8 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Syne4Q8CII8 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.78□□□□□ -1.16
Syne4Q8CII8 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
Syne4Q8CII8 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Syne4Q8CII8 AC158595.1-201ENSMUST00000217989 1435 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms