Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Gm8550-201ENSMUST00000161621 653 ntBASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Gm9167-201ENSMUST00000182469 962 ntBASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Gm21392-201ENSMUST00000182950 972 ntBASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Gm5345-201ENSMUST00000183076 1014 ntBASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 AC163621.1-201ENSMUST00000220695 379 ntBASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 AC163660.1-201ENSMUST00000223696 818 ntBASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 AC124489.3-201ENSMUST00000224037 278 ntBASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Gm44021-201ENSMUST00000203055 3516 ntBASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Snhg17-209ENSMUST00000186993 3144 ntBASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rab11fip3Q8CHD8 Gm42490-201ENSMUST00000198595 2064 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm12653-201ENSMUST00000117778 561 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm12242-201ENSMUST00000118824 738 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm4992-201ENSMUST00000120256 768 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm12929-201ENSMUST00000122406 370 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm23229-201ENSMUST00000157297 105 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm23673-201ENSMUST00000157474 298 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm16298-201ENSMUST00000161107 420 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm29470-201ENSMUST00000188007 696 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm29605-201ENSMUST00000190800 292 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm17895-201ENSMUST00000194028 874 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm43316-201ENSMUST00000197252 1295 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm43089-201ENSMUST00000199162 275 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm43849-201ENSMUST00000201086 215 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm44111-201ENSMUST00000204649 399 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm44823-201ENSMUST00000204775 1107 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm44982-201ENSMUST00000208795 471 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 AC154558.1-201ENSMUST00000222278 415 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm2139-201ENSMUST00000222569 1075 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 n-R5s217-201ENSMUST00000083341 116 ntBASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Rab11fip3Q8CHD8 Gm12919-201ENSMUST00000119855 1594 ntBASIC9.03□□□□□ -0.96
Rab11fip3Q8CHD8 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rab11fip3Q8CHD8 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC9.03□□□□□ -0.96
Rab11fip3Q8CHD8 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rab11fip3Q8CHD8 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rab11fip3Q8CHD8 Gm29670-201ENSMUST00000190228 2491 ntBASIC9.03□□□□□ -0.96
Rab11fip3Q8CHD8 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rab11fip3Q8CHD8 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rab11fip3Q8CHD8 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Rab11fip3Q8CHD8 Gm14741-201ENSMUST00000120777 1009 ntBASIC9.03□□□□□ -0.96
Rab11fip3Q8CHD8 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rab11fip3Q8CHD8 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Rab11fip3Q8CHD8 Gm23082-201ENSMUST00000157852 133 ntBASIC9.03□□□□□ -0.96
Rab11fip3Q8CHD8 Gm4202-201ENSMUST00000169025 733 ntBASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms