Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm38070-201ENSMUST00000191850 6480 ntBASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Brf1Q8CFK2 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 AC124680.1-201ENSMUST00000223923 1585 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm2178-201ENSMUST00000104927 357 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm13033-201ENSMUST00000117591 1057 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm14550-201ENSMUST00000117918 407 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm12242-201ENSMUST00000118824 738 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm14613-201ENSMUST00000122239 752 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm25281-201ENSMUST00000157270 104 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm26321-201ENSMUST00000157740 242 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm22764-201ENSMUST00000158370 92 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm43689-201ENSMUST00000195951 427 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm5717-201ENSMUST00000198243 1062 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm19088-201ENSMUST00000198800 566 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm46203-201ENSMUST00000218130 478 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 AC140288.1-201ENSMUST00000226329 503 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 AC122397.3-201ENSMUST00000227097 527 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Mir484-201ENSMUST00000093566 67 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 AC135119.1-204ENSMUST00000228036 2663 ntBASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Brf1Q8CFK2 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Gm28379-202ENSMUST00000187676 2896 ntBASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Mir674-201ENSMUST00000102421 100 ntBASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Ighv1-21-201ENSMUST00000194856 351 ntBASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Gm38216-201ENSMUST00000194872 1214 ntBASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Gm34144-201ENSMUST00000197039 259 ntBASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Gm19212-201ENSMUST00000216642 862 ntBASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Gm19047-201ENSMUST00000220922 1099 ntBASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Gm6887-201ENSMUST00000080945 482 ntBASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Gm23054-201ENSMUST00000082804 162 ntBASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Gm16123-201ENSMUST00000118647 1517 ntBASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Gm34294-201ENSMUST00000191912 4263 ntBASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.17□□□□□ -1.1
Brf1Q8CFK2 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm45297-201ENSMUST00000209893 3483 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC8.16□□□□□ -1.1
Brf1Q8CFK2 Gm11689-201ENSMUST00000120766 302 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms