Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm17834-201ENSMUST00000204322 891 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm9240-201ENSMUST00000206527 742 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 AC079644.2-201ENSMUST00000220581 322 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm7986-201ENSMUST00000221336 551 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm15229-201ENSMUST00000146636 1398 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm44121-201ENSMUST00000205169 2006 ntBASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 AC163660.4-201ENSMUST00000224983 2171 ntBASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm21051-201ENSMUST00000221757 1688 ntBASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm7690-201ENSMUST00000190885 1399 ntBASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm26416-201ENSMUST00000104280 134 ntBASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm26528-201ENSMUST00000181965 283 ntBASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm8609-201ENSMUST00000182967 998 ntBASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Mir7046-201ENSMUST00000183435 66 ntBASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm38217-201ENSMUST00000194358 910 ntBASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm43033-201ENSMUST00000199682 425 ntBASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm44683-201ENSMUST00000209088 484 ntBASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 AC148328.2-201ENSMUST00000216960 262 ntBASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm46424-201ENSMUST00000221567 168 ntBASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm2754-201ENSMUST00000223383 589 ntBASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm37080-201ENSMUST00000194804 2404 ntBASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm18508-201ENSMUST00000215790 1642 ntBASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Vps53Q8CCB4 Gm44769-201ENSMUST00000206120 2809 ntBASIC8.02□□□□□ -1.12
Vps53Q8CCB4 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Vps53Q8CCB4 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Vps53Q8CCB4 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
Vps53Q8CCB4 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Gm9144-201ENSMUST00000101625 1008 ntBASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Gm14869-201ENSMUST00000119007 884 ntBASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Gm25505-201ENSMUST00000157220 246 ntBASIC8.02□□□□□ -1.13
Vps53Q8CCB4 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Gm43929-201ENSMUST00000203025 409 ntBASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.02□□□□□ -1.13
Vps53Q8CCB4 Gm7351-201ENSMUST00000210745 580 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms