Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm42907-201ENSMUST00000199793 2148 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm37956-201ENSMUST00000195208 2010 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm38339-201ENSMUST00000195479 1829 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm9432-201ENSMUST00000117810 759 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm12024-201ENSMUST00000118819 1253 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm9208-201ENSMUST00000120468 948 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm16053-201ENSMUST00000120511 188 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm14366-201ENSMUST00000121970 730 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm26505-201ENSMUST00000176208 166 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm38181-201ENSMUST00000181357 720 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm21877-201ENSMUST00000185640 694 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm29641-201ENSMUST00000188955 259 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm18797-201ENSMUST00000190809 1174 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm36961-201ENSMUST00000191980 132 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm37581-201ENSMUST00000192371 988 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm37770-201ENSMUST00000192855 772 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm2622-201ENSMUST00000200018 471 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm44088-201ENSMUST00000204595 237 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm20997-201ENSMUST00000205148 231 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm44940-201ENSMUST00000206225 1247 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm19201-201ENSMUST00000210127 778 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm6885-201ENSMUST00000217261 372 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 CT025525.3-201ENSMUST00000228858 366 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Myo1h-201ENSMUST00000124316 2877 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Zmym1-201ENSMUST00000055013 3001 ntAPPRIS P2 TSL 2 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm12187-201ENSMUST00000119584 1375 ntBASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Trim47Q8C0E3 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm13081-201ENSMUST00000121527 5599 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm13495-201ENSMUST00000121156 537 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm16523-201ENSMUST00000121253 592 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm20430-201ENSMUST00000172474 207 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm27595-201ENSMUST00000184579 112 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm29355-201ENSMUST00000188178 697 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm28953-201ENSMUST00000188336 697 ntBASIC8.59□□□□□ -1.03
Trim47Q8C0E3 Gm20788-201ENSMUST00000190538 697 ntBASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms