Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Gm44677-201ENSMUST00000209151 3739 ntBASIC8.81□□□□□ -1
Col16a1Q8BLX7 Gm43982-201ENSMUST00000204995 1829 ntBASIC8.81□□□□□ -1
Col16a1Q8BLX7 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC8.8□□□□□ -1
Col16a1Q8BLX7 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.8□□□□□ -1
Col16a1Q8BLX7 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col16a1Q8BLX7 AC164978.1-201ENSMUST00000228608 4011 ntBASIC8.8□□□□□ -1
Col16a1Q8BLX7 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC8.8□□□□□ -1
Col16a1Q8BLX7 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.8□□□□□ -1
Col16a1Q8BLX7 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col16a1Q8BLX7 Gm15366-201ENSMUST00000118433 1019 ntBASIC8.8□□□□□ -1
Col16a1Q8BLX7 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC8.8□□□□□ -1
Col16a1Q8BLX7 Gm18199-201ENSMUST00000173820 835 ntBASIC8.8□□□□□ -1
Col16a1Q8BLX7 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC8.8□□□□□ -1
Col16a1Q8BLX7 Gm18191-201ENSMUST00000174624 824 ntBASIC8.8□□□□□ -1
Col16a1Q8BLX7 Gm29519-201ENSMUST00000186994 398 ntBASIC8.8□□□□□ -1
Col16a1Q8BLX7 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Col16a1Q8BLX7 Gm18849-201ENSMUST00000189861 560 ntBASIC8.8□□□□□ -1
Col16a1Q8BLX7 Gm36448-201ENSMUST00000199916 438 ntBASIC8.8□□□□□ -1
Col16a1Q8BLX7 AC122327.2-201ENSMUST00000220883 120 ntBASIC8.8□□□□□ -1
Col16a1Q8BLX7 AC122327.3-201ENSMUST00000221852 120 ntBASIC8.8□□□□□ -1
Col16a1Q8BLX7 AC166341.1-201ENSMUST00000223360 105 ntBASIC8.8□□□□□ -1
Col16a1Q8BLX7 A1cf-203ENSMUST00000224400 1204 ntBASIC8.8□□□□□ -1
Col16a1Q8BLX7 AC117769.2-201ENSMUST00000224612 469 ntBASIC8.8□□□□□ -1
Col16a1Q8BLX7 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC8.8□□□□□ -1
Col16a1Q8BLX7 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Col16a1Q8BLX7 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Col16a1Q8BLX7 Gm18796-201ENSMUST00000190440 1767 ntBASIC8.8□□□□□ -1
Col16a1Q8BLX7 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC8.8□□□□□ -1
Col16a1Q8BLX7 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Col16a1Q8BLX7 Gm38284-201ENSMUST00000194803 4539 ntBASIC8.8□□□□□ -1
Col16a1Q8BLX7 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Col16a1Q8BLX7 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Gm26289-201ENSMUST00000104169 131 ntBASIC8.79□□□□□ -1
Col16a1Q8BLX7 Gm23440-201ENSMUST00000104299 130 ntBASIC8.79□□□□□ -1
Col16a1Q8BLX7 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Gm11198-201ENSMUST00000119771 974 ntBASIC8.79□□□□□ -1
Col16a1Q8BLX7 Snora47-201ENSMUST00000157483 138 ntBASIC8.79□□□□□ -1
Col16a1Q8BLX7 Gm23030-201ENSMUST00000158004 273 ntBASIC8.79□□□□□ -1
Col16a1Q8BLX7 Gm23343-201ENSMUST00000158964 143 ntBASIC8.79□□□□□ -1
Col16a1Q8BLX7 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC8.79□□□□□ -1
Col16a1Q8BLX7 Mir7008-201ENSMUST00000184398 63 ntBASIC8.79□□□□□ -1
Col16a1Q8BLX7 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC8.79□□□□□ -1
Col16a1Q8BLX7 AC154563.1-201ENSMUST00000228317 442 ntBASIC8.79□□□□□ -1
Col16a1Q8BLX7 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Col16a1Q8BLX7 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC8.79□□□□□ -1
Col16a1Q8BLX7 Gm43176-201ENSMUST00000199653 2989 ntBASIC8.79□□□□□ -1
Col16a1Q8BLX7 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.79□□□□□ -1
Col16a1Q8BLX7 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Col16a1Q8BLX7 Gm9521-201ENSMUST00000206656 1516 ntBASIC8.79□□□□□ -1
Col16a1Q8BLX7 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col16a1Q8BLX7 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm11976-201ENSMUST00000119236 295 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm24719-201ENSMUST00000157520 110 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm16164-201ENSMUST00000160078 468 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm9529-201ENSMUST00000177598 579 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm27960-201ENSMUST00000183445 184 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm43235-201ENSMUST00000200121 297 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm18592-201ENSMUST00000221529 276 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 AC211878.6-201ENSMUST00000221896 358 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 AC174797.2-203ENSMUST00000224017 716 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm43864-201ENSMUST00000204452 4028 ntBASIC8.78□□□□□ -1
Col16a1Q8BLX7 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col16a1Q8BLX7 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms