Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Chmp2bQ8BJF9 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.89□□□□□ -1.31
Chmp2bQ8BJF9 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.89□□□□□ -1.31
Chmp2bQ8BJF9 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Mir503-201ENSMUST00000102168 71 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm15129-201ENSMUST00000119673 279 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm11581-201ENSMUST00000122024 763 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm26183-201ENSMUST00000157685 139 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm7420-201ENSMUST00000162836 842 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm17212-201ENSMUST00000166666 259 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Pea15b-201ENSMUST00000182806 387 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm27019-201ENSMUST00000183056 404 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm5334-201ENSMUST00000187472 720 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm29470-201ENSMUST00000188007 696 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm30517-201ENSMUST00000197350 772 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm44590-201ENSMUST00000206161 391 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm6991-201ENSMUST00000218475 1178 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm18503-201ENSMUST00000220340 728 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 n-R5s29-201ENSMUST00000082836 119 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Thap6-201ENSMUST00000191860 3151 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.88□□□□□ -1.31
Chmp2bQ8BJF9 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm45360-201ENSMUST00000210698 1405 ntBASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm23437-201ENSMUST00000104036 127 ntBASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm11972-201ENSMUST00000118514 389 ntBASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm8577-201ENSMUST00000122420 986 ntBASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm7393-201ENSMUST00000172650 739 ntBASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm25574-201ENSMUST00000175245 249 ntBASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm27026-201ENSMUST00000183003 892 ntBASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm29369-201ENSMUST00000190674 615 ntBASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm22149-202ENSMUST00000196259 137 ntBASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm21054-201ENSMUST00000203981 380 ntBASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm44213-201ENSMUST00000204977 703 ntBASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Chmp2bQ8BJF9 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms