Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Nup98Q6PFD9 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Nup98Q6PFD9 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Nup98Q6PFD9 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC7.89□□□□□ -1.15
Nup98Q6PFD9 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Nup98Q6PFD9 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Gm12565-201ENSMUST00000119004 649 ntBASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Gm18839-201ENSMUST00000204292 670 ntBASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Gm17918-201ENSMUST00000205315 574 ntBASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Gm17908-201ENSMUST00000205552 1256 ntBASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Gm2225-201ENSMUST00000209570 377 ntBASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Gm7499-201ENSMUST00000210423 813 ntBASIC7.88□□□□□ -1.15
Nup98Q6PFD9 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Nup98Q6PFD9 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gm12244-201ENSMUST00000119500 291 ntBASIC7.87□□□□□ -1.15
Nup98Q6PFD9 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gm23031-201ENSMUST00000157998 119 ntBASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gm38237-201ENSMUST00000193366 376 ntBASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gm7492-201ENSMUST00000201745 725 ntBASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gm46364-201ENSMUST00000218548 319 ntBASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gm44185-201ENSMUST00000204539 3307 ntBASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gm24888-201ENSMUST00000104387 130 ntBASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gm14870-201ENSMUST00000118414 156 ntBASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gm15300-201ENSMUST00000122324 279 ntBASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gm22820-201ENSMUST00000157205 329 ntBASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gm44360-201ENSMUST00000200081 82 ntBASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC7.87□□□□□ -1.15
Nup98Q6PFD9 A1cf-203ENSMUST00000224400 1204 ntBASIC7.87□□□□□ -1.15
Nup98Q6PFD9 AC116591.1-201ENSMUST00000227919 351 ntBASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Nup98Q6PFD9 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Nup98Q6PFD9 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Nup98Q6PFD9 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms