Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Spg11Q3UHA3 Gm13245-201ENSMUST00000119646 260 ntBASIC6.34□□□□□ -1.4
Spg11Q3UHA3 Gm14614-201ENSMUST00000119873 384 ntBASIC6.34□□□□□ -1.4
Spg11Q3UHA3 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC6.34□□□□□ -1.4
Spg11Q3UHA3 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Spg11Q3UHA3 Mir3095-201ENSMUST00000175552 87 ntBASIC6.34□□□□□ -1.4
Spg11Q3UHA3 Gm9320-201ENSMUST00000184151 473 ntBASIC6.34□□□□□ -1.4
Spg11Q3UHA3 Gm28620-201ENSMUST00000190463 439 ntBASIC6.34□□□□□ -1.4
Spg11Q3UHA3 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.34□□□□□ -1.4
Spg11Q3UHA3 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Spg11Q3UHA3 LOC665443-201ENSMUST00000212284 796 ntBASIC6.34□□□□□ -1.4
Spg11Q3UHA3 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.34□□□□□ -1.4
Spg11Q3UHA3 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Spg11Q3UHA3 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
Spg11Q3UHA3 Gm23330-201ENSMUST00000082660 164 ntBASIC6.34□□□□□ -1.4
Spg11Q3UHA3 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.34□□□□□ -1.4
Spg11Q3UHA3 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 4930470B04Rik-201ENSMUST00000192005 1926 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm43219-201ENSMUST00000197972 1937 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm44080-201ENSMUST00000204451 2214 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 AC132474.1-201ENSMUST00000214407 3686 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm44104-201ENSMUST00000204736 3777 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm22024-201ENSMUST00000122733 287 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm22599-201ENSMUST00000157597 132 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Mir5103-201ENSMUST00000175111 79 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm9167-201ENSMUST00000182469 962 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm8009-201ENSMUST00000191672 436 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm6631-201ENSMUST00000193699 559 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm35108-201ENSMUST00000194321 699 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm33191-201ENSMUST00000195604 699 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm45874-201ENSMUST00000212423 346 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm2089-201ENSMUST00000218294 479 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm24525-201ENSMUST00000082917 151 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 n-R5s204-201ENSMUST00000082972 119 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Mef2a-208ENSMUST00000156690 5538 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm7212-201ENSMUST00000120817 348 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm23669-201ENSMUST00000157470 128 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Mir7031-201ENSMUST00000183860 65 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm29470-201ENSMUST00000188007 696 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm8896-201ENSMUST00000197434 1106 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Gm42663-201ENSMUST00000199883 351 ntBASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Spg11Q3UHA3 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Spg11Q3UHA3 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Spg11Q3UHA3 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Spg11Q3UHA3 Gm43980-201ENSMUST00000204899 1612 ntBASIC6.32□□□□□ -1.4
Spg11Q3UHA3 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Spg11Q3UHA3 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Spg11Q3UHA3 Gm37161-201ENSMUST00000191994 2697 ntBASIC6.32□□□□□ -1.4
Spg11Q3UHA3 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Spg11Q3UHA3 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Spg11Q3UHA3 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Spg11Q3UHA3 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Spg11Q3UHA3 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Spg11Q3UHA3 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms