Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nkx2-3P97334 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nkx2-3P97334 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nkx2-3P97334 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nkx2-3P97334 Gm16536-201ENSMUST00000162209 1589 ntBASIC9.37□□□□□ -0.91
Nkx2-3P97334 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nkx2-3P97334 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nkx2-3P97334 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Dgkh-204ENSMUST00000227767 3319 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gm6142-201ENSMUST00000120290 325 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gm14990-201ENSMUST00000122354 445 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gm3160-201ENSMUST00000128343 607 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC9.36□□□□□ -0.91
Nkx2-3P97334 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC9.36□□□□□ -0.91
Nkx2-3P97334 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gm24190-201ENSMUST00000157976 216 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gm16138-201ENSMUST00000159341 821 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gm27762-201ENSMUST00000183417 109 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gm19480-201ENSMUST00000185547 667 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gm5261-201ENSMUST00000185860 713 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gm28416-201ENSMUST00000188334 292 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gm42164-201ENSMUST00000198881 379 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC9.36□□□□□ -0.91
Nkx2-3P97334 AC099934.1-201ENSMUST00000200493 79 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Nkx2-3P97334 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC9.36□□□□□ -0.91
Nkx2-3P97334 AC163621.2-201ENSMUST00000222229 682 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gm44104-201ENSMUST00000204736 3777 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC9.36□□□□□ -0.91
Nkx2-3P97334 Gm37410-201ENSMUST00000193623 3039 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 AC133598.5-201ENSMUST00000224937 1517 ntBASIC9.36□□□□□ -0.91
Nkx2-3P97334 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx2-3P97334 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC9.35□□□□□ -0.91
Nkx2-3P97334 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Klf5-202ENSMUST00000226784 2852 ntBASIC9.35□□□□□ -0.91
Nkx2-3P97334 CT010453.1-201ENSMUST00000226795 2201 ntBASIC9.35□□□□□ -0.91
Nkx2-3P97334 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx2-3P97334 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC9.35□□□□□ -0.91
Nkx2-3P97334 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx2-3P97334 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Gm6913-201ENSMUST00000100019 348 ntBASIC9.35□□□□□ -0.91
Nkx2-3P97334 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Gm12636-201ENSMUST00000117395 624 ntBASIC9.35□□□□□ -0.91
Nkx2-3P97334 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Gm5255-201ENSMUST00000120125 642 ntBASIC9.35□□□□□ -0.91
Nkx2-3P97334 Gm15712-201ENSMUST00000120369 1156 ntBASIC9.35□□□□□ -0.91
Nkx2-3P97334 Gm17022-201ENSMUST00000166415 922 ntBASIC9.35□□□□□ -0.91
Nkx2-3P97334 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC9.35□□□□□ -0.91
Nkx2-3P97334 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Nkx2-3P97334 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC9.35□□□□□ -0.91
Nkx2-3P97334 AC122426.2-201ENSMUST00000216522 2947 ntBASIC9.35□□□□□ -0.91
Nkx2-3P97334 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC9.35□□□□□ -0.91
Nkx2-3P97334 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx2-3P97334 AC158523.2-201ENSMUST00000222708 548 ntBASIC9.35□□□□□ -0.91
Nkx2-3P97334 AC122937.1-201ENSMUST00000226405 793 ntBASIC9.35□□□□□ -0.91
Nkx2-3P97334 AC115304.1-202ENSMUST00000226850 837 ntBASIC9.35□□□□□ -0.91
Nkx2-3P97334 AC157572.4-201ENSMUST00000228203 549 ntBASIC9.35□□□□□ -0.91
Nkx2-3P97334 AC152394.2-202ENSMUST00000228503 1064 ntBASIC9.35□□□□□ -0.91
Nkx2-3P97334 Cmtr1-201ENSMUST00000024816 6380 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Gm6863-201ENSMUST00000052882 636 ntBASIC9.35□□□□□ -0.91
Nkx2-3P97334 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Nkx2-3P97334 Gm24036-201ENSMUST00000082868 156 ntBASIC9.35□□□□□ -0.91
Nkx2-3P97334 Gm23734-201ENSMUST00000083753 109 ntBASIC9.35□□□□□ -0.91
Nkx2-3P97334 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms