Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Tpm1P58771 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Tpm1P58771 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC7.42□□□□□ -1.22
Tpm1P58771 Gm38156-201ENSMUST00000194601 2260 ntBASIC7.42□□□□□ -1.22
Tpm1P58771 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.42□□□□□ -1.22
Tpm1P58771 Gm17184-201ENSMUST00000111864 462 ntBASIC7.42□□□□□ -1.22
Tpm1P58771 Gm13414-201ENSMUST00000117516 727 ntBASIC7.42□□□□□ -1.22
Tpm1P58771 Gm14755-201ENSMUST00000118037 384 ntBASIC7.42□□□□□ -1.22
Tpm1P58771 Gm14869-201ENSMUST00000119007 884 ntBASIC7.42□□□□□ -1.22
Tpm1P58771 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Tpm1P58771 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Tpm1P58771 Gm6726-201ENSMUST00000172786 681 ntBASIC7.42□□□□□ -1.22
Tpm1P58771 Gm25082-201ENSMUST00000177296 255 ntBASIC7.42□□□□□ -1.22
Tpm1P58771 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Tpm1P58771 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.42□□□□□ -1.22
Tpm1P58771 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Tpm1P58771 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Tpm1P58771 Gm19185-201ENSMUST00000196365 643 ntBASIC7.42□□□□□ -1.22
Tpm1P58771 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC7.42□□□□□ -1.22
Tpm1P58771 Gm17950-201ENSMUST00000214617 646 ntBASIC7.42□□□□□ -1.22
Tpm1P58771 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.42□□□□□ -1.22
Tpm1P58771 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Tpm1P58771 AC131029.2-203ENSMUST00000228116 1244 ntBASIC7.42□□□□□ -1.22
Tpm1P58771 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Tpm1P58771 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Tpm1P58771 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC7.42□□□□□ -1.22
Tpm1P58771 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Tpm1P58771 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Tpm1P58771 Gm23238-201ENSMUST00000083007 164 ntBASIC7.42□□□□□ -1.22
Tpm1P58771 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Tpm1P58771 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.42□□□□□ -1.22
Tpm1P58771 AC107452.3-201ENSMUST00000228807 1308 ntBASIC7.42□□□□□ -1.22
Tpm1P58771 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Tpm1P58771 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Tpm1P58771 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Tpm1P58771 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Tpm1P58771 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC7.42□□□□□ -1.22
Tpm1P58771 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.42□□□□□ -1.22
Tpm1P58771 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Tpm1P58771 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Tpm1P58771 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 AC091783.1-201ENSMUST00000223614 1613 ntBASIC7.41□□□□□ -1.22
Tpm1P58771 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Gm21122-201ENSMUST00000191548 3452 ntBASIC7.41□□□□□ -1.22
Tpm1P58771 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Tpm1P58771 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Tpm1P58771 Gm23529-201ENSMUST00000104562 132 ntBASIC7.41□□□□□ -1.22
Tpm1P58771 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.41□□□□□ -1.22
Tpm1P58771 Gm12654-201ENSMUST00000120387 587 ntBASIC7.41□□□□□ -1.22
Tpm1P58771 BC064078-201ENSMUST00000122939 570 ntBASIC7.41□□□□□ -1.22
Tpm1P58771 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC7.41□□□□□ -1.22
Tpm1P58771 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC7.41□□□□□ -1.22
Tpm1P58771 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC7.41□□□□□ -1.22
Tpm1P58771 Gm24369-201ENSMUST00000175387 96 ntBASIC7.41□□□□□ -1.22
Tpm1P58771 Gm27507-201ENSMUST00000184199 93 ntBASIC7.41□□□□□ -1.22
Tpm1P58771 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC7.41□□□□□ -1.22
Tpm1P58771 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.41□□□□□ -1.22
Tpm1P58771 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 AC118006.3-201ENSMUST00000223948 1176 ntBASIC7.41□□□□□ -1.22
Tpm1P58771 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Tpm1P58771 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Tpm1P58771 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Tpm1P58771 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Tpm1P58771 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Tpm1P58771 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Tpm1P58771 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC7.41□□□□□ -1.22
Tpm1P58771 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Tpm1P58771 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Tpm1P58771 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC7.4□□□□□ -1.22
Tpm1P58771 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Tpm1P58771 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Tpm1P58771 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Tpm1P58771 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Tpm1P58771 AC141476.1-201ENSMUST00000224988 3387 ntBASIC7.4□□□□□ -1.22
Tpm1P58771 Gm6743-201ENSMUST00000117345 1066 ntBASIC7.4□□□□□ -1.22
Tpm1P58771 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Tpm1P58771 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC7.4□□□□□ -1.22
Tpm1P58771 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC7.4□□□□□ -1.22
Tpm1P58771 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Tpm1P58771 Gm8245-201ENSMUST00000182434 987 ntBASIC7.4□□□□□ -1.22
Tpm1P58771 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms