Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm36758-201ENSMUST00000222594 310 ntBASIC6.21□□□□□ -1.42
Cdh11P55288 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.21□□□□□ -1.42
Cdh11P55288 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.21□□□□□ -1.42
Cdh11P55288 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdh11P55288 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Cdh11P55288 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdh11P55288 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Cdh11P55288 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Cdh11P55288 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Cdh11P55288 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 Gm45657-201ENSMUST00000211318 1349 ntBASIC6.21□□□□□ -1.42
Cdh11P55288 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdh11P55288 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdh11P55288 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdh11P55288 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdh11P55288 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh11P55288 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Cdh11P55288 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Cdh11P55288 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdh11P55288 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh11P55288 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Cdh11P55288 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh11P55288 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh11P55288 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh11P55288 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh11P55288 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.2□□□□□ -1.42
Cdh11P55288 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh11P55288 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cdh11P55288 Gm22671-201ENSMUST00000104420 134 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdh11P55288 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh11P55288 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Gm15203-201ENSMUST00000117668 455 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Gm13735-201ENSMUST00000120217 670 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Gm12903-201ENSMUST00000121015 544 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.2□□□□□ -1.42
Cdh11P55288 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Gm3208-201ENSMUST00000168281 427 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Gm6061-201ENSMUST00000175860 492 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Gm5283-201ENSMUST00000177874 334 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh11P55288 Gm28117-201ENSMUST00000188472 371 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC6.2□□□□□ -1.42
Cdh11P55288 Gm37883-201ENSMUST00000194970 725 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.2□□□□□ -1.42
Cdh11P55288 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC6.2□□□□□ -1.42
Cdh11P55288 Ighv1-73-201ENSMUST00000197435 352 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.2□□□□□ -1.42
Cdh11P55288 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Gm30708-201ENSMUST00000202183 312 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Gm43905-201ENSMUST00000204516 204 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Gm45276-201ENSMUST00000209549 1086 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh11P55288 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdh11P55288 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.2□□□□□ -1.42
Cdh11P55288 Gm31711-201ENSMUST00000220687 196 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdh11P55288 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh11P55288 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdh11P55288 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh11P55288 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.2□□□□□ -1.42
Cdh11P55288 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.2□□□□□ -1.42
Cdh11P55288 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdh11P55288 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdh11P55288 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdh11P55288 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh11P55288 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh11P55288 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh11P55288 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdh11P55288 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh11P55288 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh11P55288 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Cdh11P55288 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh11P55288 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdh11P55288 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdh11P55288 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms