Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC7.71□□□□□ -1.18
Sox1P53783 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC7.71□□□□□ -1.18
Sox1P53783 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC7.71□□□□□ -1.18
Sox1P53783 Gm8512-201ENSMUST00000215367 471 ntBASIC7.71□□□□□ -1.18
Sox1P53783 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC7.71□□□□□ -1.18
Sox1P53783 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC7.71□□□□□ -1.18
Sox1P53783 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC7.71□□□□□ -1.18
Sox1P53783 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Sox1P53783 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC7.71□□□□□ -1.18
Sox1P53783 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Sox1P53783 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Hist2h2be-201ENSMUST00000090781 2620 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Sox1P53783 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Sox1P53783 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Sox1P53783 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Sox1P53783 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Serpina3f-201ENSMUST00000101080 2207 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Pes1-202ENSMUST00000109985 2923 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Sox1P53783 Gm16536-201ENSMUST00000162209 1589 ntBASIC7.71□□□□□ -1.18
Sox1P53783 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Sox1P53783 Gm9936-201ENSMUST00000201635 2925 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Sox1P53783 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Rpgr-203ENSMUST00000073392 2926 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC7.71□□□□□ -1.18
Sox1P53783 Cyp2c50-202ENSMUST00000080171 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sox1P53783 Gm37065-203ENSMUST00000192498 1622 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 Lrrc49-203ENSMUST00000114032 2586 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
Sox1P53783 Gm37289-201ENSMUST00000195409 1402 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Gm44739-201ENSMUST00000205294 1426 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Sox1P53783 AC136986.2-201ENSMUST00000220880 2944 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC7.7□□□□□ -1.18
Sox1P53783 AC170188.1-201ENSMUST00000223710 1963 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 Gm6284-201ENSMUST00000209609 4287 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Ccr6-201ENSMUST00000097418 1755 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Sox1P53783 n-R5s1-201ENSMUST00000101925 119 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Gm4596-201ENSMUST00000117197 442 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Sox1P53783 Gm14945-201ENSMUST00000119556 1118 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Gm11198-201ENSMUST00000119771 974 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Gm15009-201ENSMUST00000121387 322 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Gm5401-201ENSMUST00000122444 365 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Gm24840-201ENSMUST00000122603 147 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Gm26480-201ENSMUST00000122619 297 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 Gm26183-201ENSMUST00000157685 139 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Gm24190-201ENSMUST00000157976 216 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Gm3076-201ENSMUST00000161613 451 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Sox1P53783 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Sox1P53783 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Sox1P53783 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Sox1P53783 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Sox1P53783 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Sox1P53783 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Sox1P53783 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Sox1P53783 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Sox1P53783 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC7.7□□□□□ -1.18
Sox1P53783 Gm27186-201ENSMUST00000184223 307 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Gm27998-201ENSMUST00000184902 361 ntBASIC7.7□□□□□ -1.18
Sox1P53783 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC7.7□□□□□ -1.18
Sox1P53783 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
Sox1P53783 Gm2602-201ENSMUST00000202112 571 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC7.7□□□□□ -1.18
Sox1P53783 CT573422.1-201ENSMUST00000216655 405 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC7.7□□□□□ -1.18
Sox1P53783 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC7.7□□□□□ -1.18
Sox1P53783 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 Gm19134-201ENSMUST00000221203 487 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC7.7□□□□□ -1.18
Sox1P53783 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC7.7□□□□□ -1.18
Sox1P53783 AC117797.2-201ENSMUST00000224419 531 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Sox1P53783 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Sox1P53783 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC7.7□□□□□ -1.18
Sox1P53783 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sox1P53783 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms