Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm15242-201ENSMUST00000122459 283 ntBASIC6.43□□□□□ -1.38
Tnfsf4P43488 Gm26023-201ENSMUST00000122722 313 ntBASIC6.43□□□□□ -1.38
Tnfsf4P43488 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC6.43□□□□□ -1.38
Tnfsf4P43488 Gm22035-201ENSMUST00000157284 228 ntBASIC6.43□□□□□ -1.38
Tnfsf4P43488 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Tnfsf4P43488 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Tnfsf4P43488 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Tnfsf4P43488 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC6.43□□□□□ -1.38
Tnfsf4P43488 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Tnfsf4P43488 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.43□□□□□ -1.38
Tnfsf4P43488 AC165287.1-201ENSMUST00000224985 178 ntBASIC6.43□□□□□ -1.38
Tnfsf4P43488 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.43□□□□□ -1.38
Tnfsf4P43488 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.43□□□□□ -1.38
Tnfsf4P43488 AC161877.2-201ENSMUST00000226248 545 ntBASIC6.43□□□□□ -1.38
Tnfsf4P43488 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Tnfsf4P43488 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Tnfsf4P43488 Gm5341-201ENSMUST00000058881 489 ntBASIC6.43□□□□□ -1.38
Tnfsf4P43488 Gm28392-201ENSMUST00000077630 393 ntBASIC6.43□□□□□ -1.38
Tnfsf4P43488 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Tnfsf4P43488 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Tnfsf4P43488 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
Tnfsf4P43488 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.43□□□□□ -1.38
Tnfsf4P43488 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Tnfsf4P43488 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Tnfsf4P43488 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Tnfsf4P43488 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Tnfsf4P43488 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.43□□□□□ -1.38
Tnfsf4P43488 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Tnfsf4P43488 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Tnfsf4P43488 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Tnfsf4P43488 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Tnfsf4P43488 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Tnfsf4P43488 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Tnfsf4P43488 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Tnfsf4P43488 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.43□□□□□ -1.38
Tnfsf4P43488 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Tnfsf4P43488 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.42□□□□□ -1.38
Tnfsf4P43488 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm13265-201ENSMUST00000118090 421 ntBASIC6.42□□□□□ -1.38
Tnfsf4P43488 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm23639-201ENSMUST00000175078 132 ntBASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm18848-201ENSMUST00000182069 792 ntBASIC6.42□□□□□ -1.38
Tnfsf4P43488 Mir6241-201ENSMUST00000184225 103 ntBASIC6.42□□□□□ -1.38
Tnfsf4P43488 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm7412-201ENSMUST00000191692 605 ntBASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm20690-202ENSMUST00000195126 355 ntBASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm43141-201ENSMUST00000199695 274 ntBASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm21054-201ENSMUST00000203981 380 ntBASIC6.42□□□□□ -1.38
Tnfsf4P43488 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm9604-201ENSMUST00000211175 433 ntBASIC6.42□□□□□ -1.38
Tnfsf4P43488 AC156016.2-201ENSMUST00000228200 525 ntBASIC6.42□□□□□ -1.38
Tnfsf4P43488 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Tnfsf4P43488 AC107452.3-201ENSMUST00000228807 1308 ntBASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.42□□□□□ -1.38
Tnfsf4P43488 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Tnfsf4P43488 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Tnfsf4P43488 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Tnfsf4P43488 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.41□□□□□ -1.38
Tnfsf4P43488 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Tnfsf4P43488 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Tnfsf4P43488 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.41□□□□□ -1.38
Tnfsf4P43488 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
Tnfsf4P43488 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Tnfsf4P43488 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.41□□□□□ -1.38
Tnfsf4P43488 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Tnfsf4P43488 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Tnfsf4P43488 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Tnfsf4P43488 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Tnfsf4P43488 Gm26419-201ENSMUST00000104272 133 ntBASIC6.41□□□□□ -1.38
Tnfsf4P43488 Gm24519-201ENSMUST00000104507 132 ntBASIC6.41□□□□□ -1.38
Tnfsf4P43488 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms