Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
HttP42859 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC6.89□□□□□ -1.31
HttP42859 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC6.89□□□□□ -1.31
HttP42859 AC123665.6-201ENSMUST00000228568 538 ntBASIC6.89□□□□□ -1.31
HttP42859 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HttP42859 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
HttP42859 n-R5s46-201ENSMUST00000083960 116 ntBASIC6.89□□□□□ -1.31
HttP42859 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.89□□□□□ -1.31
HttP42859 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.89□□□□□ -1.31
HttP42859 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.89□□□□□ -1.31
HttP42859 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HttP42859 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HttP42859 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.89□□□□□ -1.31
HttP42859 Dicer1-201ENSMUST00000041987 9851 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HttP42859 Plekhb2-203ENSMUST00000156687 5176 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HttP42859 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HttP42859 CR974429.2-201ENSMUST00000221883 1696 ntBASIC6.89□□□□□ -1.31
HttP42859 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HttP42859 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
HttP42859 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HttP42859 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
HttP42859 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HttP42859 Slco2b1-203ENSMUST00000107088 4369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.88□□□□□ -1.31
HttP42859 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Gm25758-201ENSMUST00000103987 129 ntBASIC6.88□□□□□ -1.31
HttP42859 Gm14173-201ENSMUST00000117690 278 ntBASIC6.88□□□□□ -1.31
HttP42859 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC6.88□□□□□ -1.31
HttP42859 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC6.88□□□□□ -1.31
HttP42859 Gm9499-201ENSMUST00000180888 964 ntBASIC6.88□□□□□ -1.31
HttP42859 Gm37376-201ENSMUST00000192176 453 ntBASIC6.88□□□□□ -1.31
HttP42859 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC6.88□□□□□ -1.31
HttP42859 Gm43222-201ENSMUST00000199013 603 ntBASIC6.88□□□□□ -1.31
HttP42859 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
HttP42859 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.88□□□□□ -1.31
HttP42859 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
HttP42859 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
HttP42859 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.88□□□□□ -1.31
HttP42859 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.88□□□□□ -1.31
HttP42859 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.88□□□□□ -1.31
HttP42859 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
HttP42859 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.88□□□□□ -1.31
HttP42859 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Gm5353-201ENSMUST00000139800 793 ntBASIC6.88□□□□□ -1.31
HttP42859 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.88□□□□□ -1.31
HttP42859 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Gm8480-201ENSMUST00000190350 698 ntBASIC6.88□□□□□ -1.31
HttP42859 Mir5121-201ENSMUST00000198528 74 ntBASIC6.88□□□□□ -1.31
HttP42859 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.88□□□□□ -1.31
HttP42859 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
HttP42859 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Gm43062-201ENSMUST00000196302 1319 ntBASIC6.88□□□□□ -1.31
HttP42859 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC6.88□□□□□ -1.31
HttP42859 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
HttP42859 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Gpr156-201ENSMUST00000061274 4581 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HttP42859 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
HttP42859 Gm12402-201ENSMUST00000120536 334 ntBASIC6.87□□□□□ -1.31
HttP42859 Gm12936-201ENSMUST00000121439 301 ntBASIC6.87□□□□□ -1.31
HttP42859 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HttP42859 Gm26570-201ENSMUST00000180672 342 ntBASIC6.87□□□□□ -1.31
HttP42859 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.87□□□□□ -1.31
HttP42859 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.87□□□□□ -1.31
HttP42859 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HttP42859 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.87□□□□□ -1.31
HttP42859 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.87□□□□□ -1.31
HttP42859 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HttP42859 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
HttP42859 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
HttP42859 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HttP42859 Gm37274-201ENSMUST00000192167 1682 ntBASIC6.87□□□□□ -1.31
HttP42859 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HttP42859 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
HttP42859 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
HttP42859 Gm43679-201ENSMUST00000197051 3677 ntBASIC6.87□□□□□ -1.31
HttP42859 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.87□□□□□ -1.31
HttP42859 Gm14871-201ENSMUST00000119056 194 ntBASIC6.87□□□□□ -1.31
HttP42859 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC6.87□□□□□ -1.31
HttP42859 Gm26172-201ENSMUST00000158421 134 ntBASIC6.87□□□□□ -1.31
HttP42859 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC6.87□□□□□ -1.31
HttP42859 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HttP42859 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.87□□□□□ -1.31
HttP42859 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms