Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 AC123629.1-201ENSMUST00000225669 1364 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col18a1P39061 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col18a1P39061 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col18a1P39061 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Col18a1P39061 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col18a1P39061 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm11105-201ENSMUST00000112781 478 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Gm14512-201ENSMUST00000117924 230 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Gm15040-201ENSMUST00000118561 1241 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm13533-201ENSMUST00000121104 177 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Gm11834-201ENSMUST00000122257 585 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Col18a1P39061 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm21772-201ENSMUST00000169213 478 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Gm17126-201ENSMUST00000172276 523 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm43724-201ENSMUST00000197516 226 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 AC163660.1-201ENSMUST00000223696 818 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 AC163664.1-201ENSMUST00000226251 1248 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Col18a1P39061 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Col18a1P39061 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Col18a1P39061 Tmem170b-201ENSMUST00000129449 7168 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC8.94□□□□□ -0.98
Col18a1P39061 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm21846-201ENSMUST00000179257 3073 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Col18a1P39061 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Col18a1P39061 Tbc1d24-203ENSMUST00000097376 7265 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col18a1P39061 Adgrf2-201ENSMUST00000113614 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm44104-201ENSMUST00000204736 3777 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC8.94□□□□□ -0.98
Col18a1P39061 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
Col18a1P39061 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col18a1P39061 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm5841-201ENSMUST00000195307 2177 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Gm29438-201ENSMUST00000191298 2613 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col18a1P39061 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Col18a1P39061 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col18a1P39061 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.94□□□□□ -0.98
Col18a1P39061 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm24957-201ENSMUST00000179604 132 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Gm29197-201ENSMUST00000185922 702 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Gm37070-201ENSMUST00000193272 460 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm43054-201ENSMUST00000199495 884 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC8.94□□□□□ -0.98
Col18a1P39061 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC8.94□□□□□ -0.98
Col18a1P39061 AC154250.1-201ENSMUST00000224775 489 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 AC166105.1-201ENSMUST00000227512 482 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Mir331-201ENSMUST00000083673 96 ntBASIC8.94□□□□□ -0.98
Col18a1P39061 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col18a1P39061 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col18a1P39061 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC8.94□□□□□ -0.98
Col18a1P39061 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Col18a1P39061 Gm42940-201ENSMUST00000200361 2362 ntBASIC8.93□□□□□ -0.98
Col18a1P39061 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Col18a1P39061 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Col18a1P39061 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.93□□□□□ -0.98
Col18a1P39061 Gm43285-201ENSMUST00000196563 3592 ntBASIC8.93□□□□□ -0.98
Col18a1P39061 Gm37772-201ENSMUST00000191635 1394 ntBASIC8.93□□□□□ -0.98
Col18a1P39061 Pbrm1-204ENSMUST00000090214 6212 ntTSL 5 BASIC8.93□□□□□ -0.98
Col18a1P39061 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC8.93□□□□□ -0.98
Col18a1P39061 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Col18a1P39061 AC122769.3-201ENSMUST00000227739 3245 ntBASIC8.93□□□□□ -0.98
Col18a1P39061 Etohd2-201ENSMUST00000162450 4862 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Col18a1P39061 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Col18a1P39061 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Col18a1P39061 Gm13265-201ENSMUST00000118090 421 ntBASIC8.93□□□□□ -0.98
Col18a1P39061 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC8.93□□□□□ -0.98
Col18a1P39061 Gm22261-201ENSMUST00000158691 324 ntBASIC8.93□□□□□ -0.98
Col18a1P39061 Gm3008-201ENSMUST00000160566 571 ntBASIC8.93□□□□□ -0.98
Col18a1P39061 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col18a1P39061 Gm27039-201ENSMUST00000182438 962 ntBASIC8.93□□□□□ -0.98
Col18a1P39061 Gm28467-201ENSMUST00000190981 318 ntBASIC8.93□□□□□ -0.98
Col18a1P39061 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC8.93□□□□□ -0.98
Col18a1P39061 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC8.93□□□□□ -0.98
Col18a1P39061 AC156950.1-201ENSMUST00000219604 456 ntBASIC8.93□□□□□ -0.98
Col18a1P39061 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms