Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm8534-201ENSMUST00000118553 766 ntBASIC7.67□□□□□ -1.18
Col2a1P28481 Gm12229-201ENSMUST00000120487 468 ntBASIC7.67□□□□□ -1.18
Col2a1P28481 Gm12890-201ENSMUST00000120885 373 ntBASIC7.67□□□□□ -1.18
Col2a1P28481 Gm23430-201ENSMUST00000122490 314 ntBASIC7.67□□□□□ -1.18
Col2a1P28481 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col2a1P28481 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Col2a1P28481 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col2a1P28481 Gm27853-201ENSMUST00000184176 250 ntBASIC7.67□□□□□ -1.18
Col2a1P28481 Gm27998-201ENSMUST00000184902 361 ntBASIC7.67□□□□□ -1.18
Col2a1P28481 Gm28455-201ENSMUST00000189105 1290 ntBASIC7.67□□□□□ -1.18
Col2a1P28481 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC7.67□□□□□ -1.18
Col2a1P28481 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Col2a1P28481 Gm22684-201ENSMUST00000082849 132 ntBASIC7.67□□□□□ -1.18
Col2a1P28481 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col2a1P28481 AC154612.1-202ENSMUST00000224806 1725 ntBASIC7.67□□□□□ -1.18
Col2a1P28481 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col2a1P28481 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col2a1P28481 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col2a1P28481 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Col2a1P28481 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Col2a1P28481 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 AC107453.4-201ENSMUST00000227068 1817 ntBASIC7.66□□□□□ -1.18
Col2a1P28481 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC7.66□□□□□ -1.18
Col2a1P28481 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Col2a1P28481 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Col2a1P28481 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Col2a1P28481 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.66□□□□□ -1.18
Col2a1P28481 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC7.66□□□□□ -1.18
Col2a1P28481 Gm14300-201ENSMUST00000120800 946 ntBASIC7.66□□□□□ -1.18
Col2a1P28481 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Col2a1P28481 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 Gm28918-201ENSMUST00000188822 699 ntBASIC7.66□□□□□ -1.18
Col2a1P28481 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC7.66□□□□□ -1.18
Col2a1P28481 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 BC049739-201ENSMUST00000202626 660 ntBASIC7.66□□□□□ -1.18
Col2a1P28481 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC7.66□□□□□ -1.18
Col2a1P28481 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC7.66□□□□□ -1.18
Col2a1P28481 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.66□□□□□ -1.18
Col2a1P28481 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Col2a1P28481 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC7.66□□□□□ -1.18
Col2a1P28481 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC7.66□□□□□ -1.18
Col2a1P28481 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col2a1P28481 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col2a1P28481 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col2a1P28481 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col2a1P28481 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col2a1P28481 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Col2a1P28481 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col2a1P28481 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col2a1P28481 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col2a1P28481 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col2a1P28481 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col2a1P28481 AC135083.2-201ENSMUST00000228599 1456 ntBASIC7.65□□□□□ -1.18
Col2a1P28481 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col2a1P28481 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col2a1P28481 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Col2a1P28481 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC7.65□□□□□ -1.18
Col2a1P28481 Gm37809-201ENSMUST00000195050 931 ntBASIC7.65□□□□□ -1.18
Col2a1P28481 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col2a1P28481 AC117769.2-201ENSMUST00000224612 469 ntBASIC7.65□□□□□ -1.18
Col2a1P28481 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Col2a1P28481 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Col2a1P28481 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col2a1P28481 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col2a1P28481 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Col2a1P28481 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.19
Col2a1P28481 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col2a1P28481 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col2a1P28481 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Col2a1P28481 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.65□□□□□ -1.19
Col2a1P28481 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Col2a1P28481 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col2a1P28481 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Col2a1P28481 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col2a1P28481 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.19
Col2a1P28481 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col2a1P28481 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col2a1P28481 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC7.65□□□□□ -1.19
Col2a1P28481 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col2a1P28481 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col2a1P28481 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Col2a1P28481 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms