Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC4.91□□□□□ -1.62
TcraP01849 Gm45246-201ENSMUST00000210820 367 ntBASIC4.91□□□□□ -1.62
TcraP01849 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC4.91□□□□□ -1.62
TcraP01849 Gm18860-201ENSMUST00000212029 764 ntBASIC4.91□□□□□ -1.62
TcraP01849 Gm34424-201ENSMUST00000213400 782 ntBASIC4.91□□□□□ -1.62
TcraP01849 CT010472.1-201ENSMUST00000224000 704 ntBASIC4.91□□□□□ -1.62
TcraP01849 AC140208.1-201ENSMUST00000226609 285 ntBASIC4.91□□□□□ -1.62
TcraP01849 AC125117.2-201ENSMUST00000228344 1140 ntBASIC4.91□□□□□ -1.62
TcraP01849 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TcraP01849 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC4.91□□□□□ -1.62
TcraP01849 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TcraP01849 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
TcraP01849 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TcraP01849 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
TcraP01849 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TcraP01849 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TcraP01849 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TcraP01849 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
TcraP01849 Gm37435-201ENSMUST00000192078 3947 ntBASIC4.91□□□□□ -1.62
TcraP01849 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
TcraP01849 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TcraP01849 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TcraP01849 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TcraP01849 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TcraP01849 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TcraP01849 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC4.91□□□□□ -1.62
TcraP01849 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TcraP01849 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
TcraP01849 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.62
TcraP01849 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TcraP01849 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TcraP01849 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
TcraP01849 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.62
TcraP01849 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC4.9□□□□□ -1.62
TcraP01849 AC162936.1-201ENSMUST00000223676 2368 ntBASIC4.9□□□□□ -1.62
TcraP01849 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TcraP01849 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC4.9□□□□□ -1.62
TcraP01849 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
TcraP01849 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TcraP01849 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
TcraP01849 Gm37518-201ENSMUST00000194930 2603 ntBASIC4.9□□□□□ -1.62
TcraP01849 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TcraP01849 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
TcraP01849 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC4.9□□□□□ -1.62
TcraP01849 Gm23323-201ENSMUST00000104471 133 ntBASIC4.9□□□□□ -1.63
TcraP01849 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
TcraP01849 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 Gm13878-201ENSMUST00000117986 577 ntBASIC4.9□□□□□ -1.63
TcraP01849 Gm12677-201ENSMUST00000118668 426 ntBASIC4.9□□□□□ -1.63
TcraP01849 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 Gm12361-201ENSMUST00000119806 1044 ntBASIC4.9□□□□□ -1.63
TcraP01849 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC4.9□□□□□ -1.63
TcraP01849 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
TcraP01849 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 Gm24738-201ENSMUST00000158856 123 ntBASIC4.9□□□□□ -1.63
TcraP01849 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC4.9□□□□□ -1.63
TcraP01849 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC4.9□□□□□ -1.63
TcraP01849 Gm21430-201ENSMUST00000182998 998 ntBASIC4.9□□□□□ -1.63
TcraP01849 Gm5787-201ENSMUST00000183049 1038 ntBASIC4.9□□□□□ -1.63
TcraP01849 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC4.9□□□□□ -1.63
TcraP01849 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC4.9□□□□□ -1.63
TcraP01849 Mir6922-201ENSMUST00000185099 66 ntBASIC4.9□□□□□ -1.63
TcraP01849 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC4.9□□□□□ -1.63
TcraP01849 Gm28728-201ENSMUST00000189087 405 ntBASIC4.9□□□□□ -1.63
TcraP01849 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
TcraP01849 Gm37729-201ENSMUST00000194761 1172 ntBASIC4.9□□□□□ -1.63
TcraP01849 Gm26413-202ENSMUST00000198972 127 ntBASIC4.9□□□□□ -1.63
TcraP01849 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC4.9□□□□□ -1.63
TcraP01849 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC4.9□□□□□ -1.63
TcraP01849 Gm8921-201ENSMUST00000204306 649 ntBASIC4.9□□□□□ -1.63
TcraP01849 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 Gm6850-201ENSMUST00000210031 530 ntBASIC4.9□□□□□ -1.63
TcraP01849 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC4.9□□□□□ -1.63
TcraP01849 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC4.9□□□□□ -1.63
TcraP01849 Gm36758-201ENSMUST00000222594 310 ntBASIC4.9□□□□□ -1.63
TcraP01849 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC4.9□□□□□ -1.63
TcraP01849 CT009556.3-201ENSMUST00000226173 513 ntBASIC4.9□□□□□ -1.63
TcraP01849 AC156790.1-201ENSMUST00000226572 559 ntBASIC4.9□□□□□ -1.63
TcraP01849 AC131586.4-201ENSMUST00000228424 668 ntBASIC4.9□□□□□ -1.63
TcraP01849 AC124715.1-201ENSMUST00000228480 754 ntBASIC4.9□□□□□ -1.63
TcraP01849 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TcraP01849 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
TcraP01849 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 AC122769.3-201ENSMUST00000227739 3245 ntBASIC4.9□□□□□ -1.63
TcraP01849 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
TcraP01849 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
TcraP01849 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TcraP01849 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms