Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm14932-201ENSMUST00000117112 453 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm14795-201ENSMUST00000118461 471 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm13325-201ENSMUST00000118746 806 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm13915-201ENSMUST00000119314 931 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm12444-201ENSMUST00000121512 877 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm15096-201ENSMUST00000121918 878 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm15501-202ENSMUST00000140687 625 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm4252-201ENSMUST00000174823 313 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm9399-201ENSMUST00000175771 639 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Mir7669-201ENSMUST00000183442 58 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm27972-201ENSMUST00000184720 137 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm37727-201ENSMUST00000191637 819 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm6680-201ENSMUST00000192789 950 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm42489-201ENSMUST00000198964 669 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm43725-201ENSMUST00000200122 369 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm45269-201ENSMUST00000210359 282 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm17950-201ENSMUST00000214617 646 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 AL590616.1-201ENSMUST00000223339 574 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm6369-201ENSMUST00000069626 412 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm26063-201ENSMUST00000083378 107 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm43961-201ENSMUST00000203289 1872 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm14032-201ENSMUST00000117686 1026 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm5752-201ENSMUST00000117771 594 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm23317-201ENSMUST00000157999 129 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm24754-201ENSMUST00000177997 107 ntBASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Pcdh1F7BJK1 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms