Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Acpp-202ENSMUST00000112590 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm10764-202ENSMUST00000220397 2335 ntBASIC3.68□□□□□ -1.82
Herc1E9PZP8 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm13531-201ENSMUST00000121893 543 ntBASIC3.68□□□□□ -1.82
Herc1E9PZP8 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm4997-201ENSMUST00000154056 360 ntBASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm23082-201ENSMUST00000157852 133 ntBASIC3.68□□□□□ -1.82
Herc1E9PZP8 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm26925-201ENSMUST00000182470 957 ntBASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm27034-201ENSMUST00000182552 940 ntBASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm18699-201ENSMUST00000190713 243 ntBASIC3.68□□□□□ -1.82
Herc1E9PZP8 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm46364-201ENSMUST00000218548 319 ntBASIC3.68□□□□□ -1.82
Herc1E9PZP8 AC116724.1-201ENSMUST00000227900 972 ntBASIC3.68□□□□□ -1.82
Herc1E9PZP8 Mir135a-1-201ENSMUST00000083473 90 ntBASIC3.68□□□□□ -1.82
Herc1E9PZP8 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Dpp4-201ENSMUST00000047812 5268 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Nod2-202ENSMUST00000109634 4666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Herc1E9PZP8 Gm43071-201ENSMUST00000197233 2032 ntBASIC3.68□□□□□ -1.82
Herc1E9PZP8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm37295-201ENSMUST00000192186 109 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Herc1E9PZP8 CT571245.1-201ENSMUST00000218642 3465 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm37960-201ENSMUST00000192402 1897 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm38262-201ENSMUST00000194760 1382 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm45407-201ENSMUST00000209499 3676 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm10062-201ENSMUST00000072180 1470 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 Adgrl3-213ENSMUST00000120292 5026 ntTSL 5 BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm6031-201ENSMUST00000121314 1054 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 Magea9-ps-201ENSMUST00000140655 732 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 Magea9-ps-202ENSMUST00000167328 899 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm27896-201ENSMUST00000175162 317 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm38053-201ENSMUST00000193938 160 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 Rnu3a-202ENSMUST00000196710 213 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm44265-201ENSMUST00000203631 465 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm45596-201ENSMUST00000209279 434 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 AC132587.1-201ENSMUST00000220562 166 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 Thoc7-209ENSMUST00000225325 765 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 Rnu3a-201ENSMUST00000083936 214 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.67□□□□□ -1.82
Herc1E9PZP8 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC3.67□□□□□ -1.82
Herc1E9PZP8 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms