Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Gm11581-201ENSMUST00000122024 763 ntBASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Gm25178-201ENSMUST00000122633 325 ntBASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Gm24812-201ENSMUST00000175315 284 ntBASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Gm5711-201ENSMUST00000197896 421 ntBASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Gm43772-201ENSMUST00000202052 379 ntBASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.85□□□□□ -1.31
Srp54bE9PXC0 AC125405.2-201ENSMUST00000227862 383 ntBASIC6.85□□□□□ -1.31
Srp54bE9PXC0 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.85□□□□□ -1.31
Srp54bE9PXC0 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Srp54bE9PXC0 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gm37790-201ENSMUST00000193136 3346 ntBASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 AC159195.2-201ENSMUST00000223670 3757 ntBASIC6.84□□□□□ -1.31
Srp54bE9PXC0 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gm23768-201ENSMUST00000104440 131 ntBASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gm7494-201ENSMUST00000121248 441 ntBASIC6.84□□□□□ -1.31
Srp54bE9PXC0 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gm23617-201ENSMUST00000175410 95 ntBASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gm22990-201ENSMUST00000175427 89 ntBASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gm7804-202ENSMUST00000194187 854 ntBASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gm43048-201ENSMUST00000196101 388 ntBASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gm43141-201ENSMUST00000199695 274 ntBASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.84□□□□□ -1.31
Srp54bE9PXC0 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.84□□□□□ -1.31
Srp54bE9PXC0 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6.84□□□□□ -1.31
Srp54bE9PXC0 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC6.84□□□□□ -1.32
Srp54bE9PXC0 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Srp54bE9PXC0 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
Srp54bE9PXC0 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
Srp54bE9PXC0 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
Srp54bE9PXC0 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Srp54bE9PXC0 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
Srp54bE9PXC0 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.83□□□□□ -1.32
Srp54bE9PXC0 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Srp54bE9PXC0 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.83□□□□□ -1.32
Srp54bE9PXC0 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms