Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Gm16082-201ENSMUST00000115992 377 ntBASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Gm14172-201ENSMUST00000118255 644 ntBASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Gm26942-201ENSMUST00000182854 797 ntBASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Rims2-205ENSMUST00000227243 4760 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.5□□□□□ -1.37
Col6a3E9PWQ3 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Gm14908-201ENSMUST00000120930 1286 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Gm23894-201ENSMUST00000158107 313 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Gm26923-201ENSMUST00000182615 996 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 AC122372.1-201ENSMUST00000215344 280 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Gm24888-201ENSMUST00000104387 130 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Gm20673-201ENSMUST00000177167 430 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 AL713985.1-201ENSMUST00000219030 420 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Crispld1-201ENSMUST00000095075 4472 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Gm15331-201ENSMUST00000120225 385 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Gm12400-201ENSMUST00000120915 1003 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Gm12399-201ENSMUST00000121475 446 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Gm37295-201ENSMUST00000192186 109 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Gm18838-201ENSMUST00000204855 886 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Gm45724-201ENSMUST00000213031 420 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 AC125190.2-201ENSMUST00000221160 497 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.49□□□□□ -1.37
Col6a3E9PWQ3 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm37706-201ENSMUST00000195379 2765 ntBASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Mir7047-201ENSMUST00000184595 64 ntBASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm38670-201ENSMUST00000199248 77 ntBASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm19182-201ENSMUST00000207139 577 ntBASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm45777-201ENSMUST00000213009 301 ntBASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm7333-201ENSMUST00000213449 1060 ntBASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gtf2a1-201ENSMUST00000021345 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm12710-201ENSMUST00000119011 216 ntBASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms