Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Asph-208ENSMUST00000108334 2685 ntTSL 5 BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Gm42571-201ENSMUST00000201197 2464 ntBASIC1.65□□□□□ -2.14
Gm4559A4IF42 AC154227.1-201ENSMUST00000228809 2467 ntBASIC1.65□□□□□ -2.14
Gm4559A4IF42 Gm37672-201ENSMUST00000192682 4014 ntBASIC1.65□□□□□ -2.14
Gm4559A4IF42 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Gm42909-201ENSMUST00000196982 3619 ntBASIC1.65□□□□□ -2.14
Gm4559A4IF42 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Gm20300-201ENSMUST00000214634 3440 ntBASIC1.65□□□□□ -2.14
Gm4559A4IF42 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.65□□□□□ -2.14
Gm4559A4IF42 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Prpf31-201ENSMUST00000008517 3144 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.14
Gm4559A4IF42 AC122811.1-201ENSMUST00000222257 2921 ntBASIC1.65□□□□□ -2.14
Gm4559A4IF42 Cipc-205ENSMUST00000187814 4098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Cipc-201ENSMUST00000038369 4098 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 AC122335.2-201ENSMUST00000213901 6181 ntBASIC1.65□□□□□ -2.15
Gm4559A4IF42 Net1-202ENSMUST00000099946 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Gm29170-201ENSMUST00000190224 3666 ntBASIC1.65□□□□□ -2.15
Gm4559A4IF42 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Epn2-201ENSMUST00000001063 4243 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Gm14150-201ENSMUST00000122404 1354 ntBASIC1.65□□□□□ -2.15
Gm4559A4IF42 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Cyp2d37-ps-201ENSMUST00000100380 590 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Gm22022-201ENSMUST00000104355 127 ntBASIC1.65□□□□□ -2.15
Gm4559A4IF42 Gm24372-201ENSMUST00000104400 110 ntBASIC1.65□□□□□ -2.15
Gm4559A4IF42 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Gm4559A4IF42 Serpina3h-202ENSMUST00000116393 1226 ntBASIC1.65□□□□□ -2.15
Gm4559A4IF42 Gm13035-201ENSMUST00000117496 342 ntBASIC1.65□□□□□ -2.15
Gm4559A4IF42 Gm16202-201ENSMUST00000117532 544 ntBASIC1.65□□□□□ -2.15
Gm4559A4IF42 Gm7851-201ENSMUST00000117574 323 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms