Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cx3cr1Q9Z0D9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cx3cr1Q9Z0D9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cx3cr1Q9Z0D9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cx3cr1Q9Z0D9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.47■□□□□ 0.07
Cx3cr1Q9Z0D9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cx3cr1Q9Z0D9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cx3cr1Q9Z0D9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cx3cr1Q9Z0D9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cx3cr1Q9Z0D9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cx3cr1Q9Z0D9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cx3cr1Q9Z0D9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cx3cr1Q9Z0D9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.47■□□□□ 0.07
Cx3cr1Q9Z0D9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cx3cr1Q9Z0D9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Cx3cr1Q9Z0D9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cx3cr1Q9Z0D9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.45■□□□□ 0.06
Cx3cr1Q9Z0D9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cx3cr1Q9Z0D9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cx3cr1Q9Z0D9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cx3cr1Q9Z0D9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.45■□□□□ 0.06
Cx3cr1Q9Z0D9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cx3cr1Q9Z0D9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cx3cr1Q9Z0D9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cx3cr1Q9Z0D9 Gm14117-201ENSMUST00000122417 843 ntBASIC15.45■□□□□ 0.06
Cx3cr1Q9Z0D9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cx3cr1Q9Z0D9 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.45■□□□□ 0.06
Cx3cr1Q9Z0D9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Cx3cr1Q9Z0D9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cx3cr1Q9Z0D9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cx3cr1Q9Z0D9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 Fst-202ENSMUST00000223640 2612 ntBASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 Rps24-207ENSMUST00000224568 714 ntBASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cx3cr1Q9Z0D9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 Gm11421-201ENSMUST00000122124 294 ntBASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 Gm27801-201ENSMUST00000184174 223 ntBASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cx3cr1Q9Z0D9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cx3cr1Q9Z0D9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cx3cr1Q9Z0D9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cx3cr1Q9Z0D9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cx3cr1Q9Z0D9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Cx3cr1Q9Z0D9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 125.9 ms