Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn5Q9WVD4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn5Q9WVD4 BC021767-201ENSMUST00000126387 1716 ntBASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Gm2399-201ENSMUST00000104944 225 ntBASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Gm13158-201ENSMUST00000122007 736 ntBASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Mir5122-201ENSMUST00000175004 89 ntBASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn5Q9WVD4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Clcn5Q9WVD4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn5Q9WVD4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Clcn5Q9WVD4 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.87■□□□□ 0.61
Clcn5Q9WVD4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.87■□□□□ 0.61
Clcn5Q9WVD4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn5Q9WVD4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn5Q9WVD4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Clcn5Q9WVD4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn5Q9WVD4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn5Q9WVD4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn5Q9WVD4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn5Q9WVD4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn5Q9WVD4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn5Q9WVD4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn5Q9WVD4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn5Q9WVD4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn5Q9WVD4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn5Q9WVD4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.86■□□□□ 0.61
Clcn5Q9WVD4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn5Q9WVD4 Gm10819-201ENSMUST00000099988 561 ntBASIC18.86■□□□□ 0.61
Clcn5Q9WVD4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Clcn5Q9WVD4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn5Q9WVD4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn5Q9WVD4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn5Q9WVD4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Clcn5Q9WVD4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn5Q9WVD4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn5Q9WVD4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn5Q9WVD4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.84■□□□□ 0.61
Clcn5Q9WVD4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn5Q9WVD4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn5Q9WVD4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn5Q9WVD4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn5Q9WVD4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn5Q9WVD4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn5Q9WVD4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn5Q9WVD4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.84■□□□□ 0.61
Clcn5Q9WVD4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn5Q9WVD4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn5Q9WVD4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn5Q9WVD4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn5Q9WVD4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Clcn5Q9WVD4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Clcn5Q9WVD4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn5Q9WVD4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.83■□□□□ 0.61
Clcn5Q9WVD4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Clcn5Q9WVD4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Clcn5Q9WVD4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn5Q9WVD4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Clcn5Q9WVD4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Clcn5Q9WVD4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.83■□□□□ 0.6
Clcn5Q9WVD4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.83■□□□□ 0.6
Clcn5Q9WVD4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Clcn5Q9WVD4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Clcn5Q9WVD4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn5Q9WVD4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn5Q9WVD4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms