Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn8aQ9WTU3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.46■□□□□ 0.54
Scn8aQ9WTU3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.46■□□□□ 0.54
Scn8aQ9WTU3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn8aQ9WTU3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Scn8aQ9WTU3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn8aQ9WTU3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn8aQ9WTU3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn8aQ9WTU3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn8aQ9WTU3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn8aQ9WTU3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn8aQ9WTU3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn8aQ9WTU3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn8aQ9WTU3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn8aQ9WTU3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Scn8aQ9WTU3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn8aQ9WTU3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn8aQ9WTU3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn8aQ9WTU3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn8aQ9WTU3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn8aQ9WTU3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn8aQ9WTU3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn8aQ9WTU3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.44■□□□□ 0.54
Scn8aQ9WTU3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.44■□□□□ 0.54
Scn8aQ9WTU3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn8aQ9WTU3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn8aQ9WTU3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn8aQ9WTU3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn8aQ9WTU3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn8aQ9WTU3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Scn8aQ9WTU3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.43■□□□□ 0.54
Scn8aQ9WTU3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn8aQ9WTU3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Scn8aQ9WTU3 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.43■□□□□ 0.54
Scn8aQ9WTU3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.43■□□□□ 0.54
Scn8aQ9WTU3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn8aQ9WTU3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Scn8aQ9WTU3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn8aQ9WTU3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn8aQ9WTU3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Scn8aQ9WTU3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Scn8aQ9WTU3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn8aQ9WTU3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn8aQ9WTU3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn8aQ9WTU3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn8aQ9WTU3 Gm15378-201ENSMUST00000121894 207 ntBASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 Mir6349-201ENSMUST00000184059 97 ntBASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 Mir1199-201ENSMUST00000117015 119 ntBASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 Gm12382-201ENSMUST00000122005 922 ntBASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 Gm10138-203ENSMUST00000206952 366 ntBASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn8aQ9WTU3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn8aQ9WTU3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn8aQ9WTU3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Scn8aQ9WTU3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn8aQ9WTU3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn8aQ9WTU3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Scn8aQ9WTU3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn8aQ9WTU3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn8aQ9WTU3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.41■□□□□ 0.54
Scn8aQ9WTU3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn8aQ9WTU3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn8aQ9WTU3 Gm715-201ENSMUST00000117865 831 ntBASIC18.41■□□□□ 0.54
Scn8aQ9WTU3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Scn8aQ9WTU3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn8aQ9WTU3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Scn8aQ9WTU3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.4■□□□□ 0.54
Scn8aQ9WTU3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn8aQ9WTU3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn8aQ9WTU3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn8aQ9WTU3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn8aQ9WTU3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Scn8aQ9WTU3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Scn8aQ9WTU3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn8aQ9WTU3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.39■□□□□ 0.53
Scn8aQ9WTU3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.39■□□□□ 0.53
Scn8aQ9WTU3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn8aQ9WTU3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn8aQ9WTU3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Scn8aQ9WTU3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn8aQ9WTU3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.39■□□□□ 0.53
Scn8aQ9WTU3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.39■□□□□ 0.53
Scn8aQ9WTU3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.39■□□□□ 0.53
Scn8aQ9WTU3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.39■□□□□ 0.53
Scn8aQ9WTU3 Mir5122-201ENSMUST00000175004 89 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms