Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf40aQ9R1C7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.08■□□□□ 0.81
Prpf40aQ9R1C7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.08■□□□□ 0.81
Prpf40aQ9R1C7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.08■□□□□ 0.81
Prpf40aQ9R1C7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.08■□□□□ 0.81
Prpf40aQ9R1C7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.08■□□□□ 0.81
Prpf40aQ9R1C7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
Prpf40aQ9R1C7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf40aQ9R1C7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf40aQ9R1C7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf40aQ9R1C7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf40aQ9R1C7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf40aQ9R1C7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.07■□□□□ 0.8
Prpf40aQ9R1C7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf40aQ9R1C7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf40aQ9R1C7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf40aQ9R1C7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf40aQ9R1C7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Prpf40aQ9R1C7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf40aQ9R1C7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Prpf40aQ9R1C7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf40aQ9R1C7 Gm37179-201ENSMUST00000194862 823 ntBASIC20.06■□□□□ 0.8
Prpf40aQ9R1C7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.06■□□□□ 0.8
Prpf40aQ9R1C7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf40aQ9R1C7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf40aQ9R1C7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf40aQ9R1C7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf40aQ9R1C7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf40aQ9R1C7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf40aQ9R1C7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.05■□□□□ 0.8
Prpf40aQ9R1C7 Gm7290-201ENSMUST00000104990 617 ntBASIC20.05■□□□□ 0.8
Prpf40aQ9R1C7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf40aQ9R1C7 Gm12918-201ENSMUST00000120234 636 ntBASIC20.05■□□□□ 0.8
Prpf40aQ9R1C7 Gm15710-201ENSMUST00000121821 636 ntBASIC20.05■□□□□ 0.8
Prpf40aQ9R1C7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.05■□□□□ 0.8
Prpf40aQ9R1C7 Gm5075-201ENSMUST00000196916 622 ntBASIC20.05■□□□□ 0.8
Prpf40aQ9R1C7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.05■□□□□ 0.8
Prpf40aQ9R1C7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.05■□□□□ 0.8
Prpf40aQ9R1C7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf40aQ9R1C7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf40aQ9R1C7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf40aQ9R1C7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf40aQ9R1C7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf40aQ9R1C7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf40aQ9R1C7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf40aQ9R1C7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf40aQ9R1C7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf40aQ9R1C7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf40aQ9R1C7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf40aQ9R1C7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf40aQ9R1C7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf40aQ9R1C7 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.04■□□□□ 0.8
Prpf40aQ9R1C7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Prpf40aQ9R1C7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf40aQ9R1C7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf40aQ9R1C7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.02■□□□□ 0.8
Prpf40aQ9R1C7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf40aQ9R1C7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.02■□□□□ 0.8
Prpf40aQ9R1C7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf40aQ9R1C7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf40aQ9R1C7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Prpf40aQ9R1C7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf40aQ9R1C7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf40aQ9R1C7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prpf40aQ9R1C7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Prpf40aQ9R1C7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Prpf40aQ9R1C7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.02■□□□□ 0.79
Prpf40aQ9R1C7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Prpf40aQ9R1C7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf40aQ9R1C7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Prpf40aQ9R1C7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Prpf40aQ9R1C7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf40aQ9R1C7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Prpf40aQ9R1C7 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.01■□□□□ 0.79
Prpf40aQ9R1C7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms