Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn2Q9R0A1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clcn2Q9R0A1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn2Q9R0A1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn2Q9R0A1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn2Q9R0A1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn2Q9R0A1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Clcn2Q9R0A1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn2Q9R0A1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn2Q9R0A1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn2Q9R0A1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn2Q9R0A1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn2Q9R0A1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn2Q9R0A1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn2Q9R0A1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn2Q9R0A1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn2Q9R0A1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn2Q9R0A1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clcn2Q9R0A1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn2Q9R0A1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn2Q9R0A1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.62■□□□□ 0.57
Clcn2Q9R0A1 Gm13534-201ENSMUST00000121169 513 ntBASIC18.62■□□□□ 0.57
Clcn2Q9R0A1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Clcn2Q9R0A1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn2Q9R0A1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.62■□□□□ 0.57
Clcn2Q9R0A1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.62■□□□□ 0.57
Clcn2Q9R0A1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.62■□□□□ 0.57
Clcn2Q9R0A1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn2Q9R0A1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.62■□□□□ 0.57
Clcn2Q9R0A1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn2Q9R0A1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn2Q9R0A1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Clcn2Q9R0A1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clcn2Q9R0A1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Clcn2Q9R0A1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn2Q9R0A1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn2Q9R0A1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn2Q9R0A1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn2Q9R0A1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn2Q9R0A1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn2Q9R0A1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.61■□□□□ 0.57
Clcn2Q9R0A1 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.61■□□□□ 0.57
Clcn2Q9R0A1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn2Q9R0A1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Clcn2Q9R0A1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.61■□□□□ 0.57
Clcn2Q9R0A1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Clcn2Q9R0A1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn2Q9R0A1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Clcn2Q9R0A1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clcn2Q9R0A1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn2Q9R0A1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.6■□□□□ 0.57
Clcn2Q9R0A1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn2Q9R0A1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn2Q9R0A1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn2Q9R0A1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn2Q9R0A1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn2Q9R0A1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn2Q9R0A1 Gm37179-201ENSMUST00000194862 823 ntBASIC18.6■□□□□ 0.57
Clcn2Q9R0A1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn2Q9R0A1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Clcn2Q9R0A1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn2Q9R0A1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn2Q9R0A1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn2Q9R0A1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn2Q9R0A1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn2Q9R0A1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.6■□□□□ 0.57
Clcn2Q9R0A1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn2Q9R0A1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn2Q9R0A1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn2Q9R0A1 Fst-202ENSMUST00000223640 2612 ntBASIC18.59■□□□□ 0.57
Clcn2Q9R0A1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn2Q9R0A1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn2Q9R0A1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Clcn2Q9R0A1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn2Q9R0A1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn2Q9R0A1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.59■□□□□ 0.57
Clcn2Q9R0A1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn2Q9R0A1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn2Q9R0A1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clcn2Q9R0A1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Clcn2Q9R0A1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn2Q9R0A1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Clcn2Q9R0A1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn2Q9R0A1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn2Q9R0A1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Clcn2Q9R0A1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn2Q9R0A1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn2Q9R0A1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn2Q9R0A1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.58■□□□□ 0.56
Clcn2Q9R0A1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn2Q9R0A1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.58■□□□□ 0.56
Clcn2Q9R0A1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn2Q9R0A1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn2Q9R0A1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn2Q9R0A1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn2Q9R0A1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn2Q9R0A1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms