Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Nubp2Q9R061 Gm13534-201ENSMUST00000121169 513 ntBASIC16.16■□□□□ 0.18
Nubp2Q9R061 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nubp2Q9R061 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Nubp2Q9R061 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nubp2Q9R061 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nubp2Q9R061 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nubp2Q9R061 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nubp2Q9R061 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nubp2Q9R061 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nubp2Q9R061 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nubp2Q9R061 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nubp2Q9R061 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nubp2Q9R061 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nubp2Q9R061 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Nubp2Q9R061 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.15■□□□□ 0.18
Nubp2Q9R061 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nubp2Q9R061 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nubp2Q9R061 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Nubp2Q9R061 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.15■□□□□ 0.18
Nubp2Q9R061 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nubp2Q9R061 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nubp2Q9R061 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nubp2Q9R061 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Nubp2Q9R061 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Nubp2Q9R061 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.14■□□□□ 0.18
Nubp2Q9R061 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Nubp2Q9R061 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.14■□□□□ 0.17
Nubp2Q9R061 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.14■□□□□ 0.17
Nubp2Q9R061 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nubp2Q9R061 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Mir5133-201ENSMUST00000174955 77 ntBASIC16.13■□□□□ 0.17
Nubp2Q9R061 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nubp2Q9R061 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.12■□□□□ 0.17
Nubp2Q9R061 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nubp2Q9R061 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nubp2Q9R061 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nubp2Q9R061 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.12■□□□□ 0.17
Nubp2Q9R061 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nubp2Q9R061 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nubp2Q9R061 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nubp2Q9R061 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nubp2Q9R061 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nubp2Q9R061 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nubp2Q9R061 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nubp2Q9R061 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nubp2Q9R061 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nubp2Q9R061 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nubp2Q9R061 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nubp2Q9R061 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.12■□□□□ 0.17
Nubp2Q9R061 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nubp2Q9R061 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.12■□□□□ 0.17
Nubp2Q9R061 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nubp2Q9R061 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Nubp2Q9R061 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nubp2Q9R061 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nubp2Q9R061 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nubp2Q9R061 Gm6420-201ENSMUST00000193885 723 ntBASIC16.11■□□□□ 0.17
Nubp2Q9R061 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.11■□□□□ 0.17
Nubp2Q9R061 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nubp2Q9R061 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nubp2Q9R061 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nubp2Q9R061 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.11■□□□□ 0.17
Nubp2Q9R061 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nubp2Q9R061 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms