Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col4a4Q9QZR9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col4a4Q9QZR9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col4a4Q9QZR9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col4a4Q9QZR9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Col4a4Q9QZR9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.51■□□□□ 0.55
Col4a4Q9QZR9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Col4a4Q9QZR9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a4Q9QZR9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Col4a4Q9QZR9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.51■□□□□ 0.55
Col4a4Q9QZR9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Col4a4Q9QZR9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.51■□□□□ 0.55
Col4a4Q9QZR9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a4Q9QZR9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a4Q9QZR9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.51■□□□□ 0.55
Col4a4Q9QZR9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Col4a4Q9QZR9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a4Q9QZR9 Mzt1-203ENSMUST00000227948 952 ntBASIC18.5■□□□□ 0.55
Col4a4Q9QZR9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
Col4a4Q9QZR9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Col4a4Q9QZR9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a4Q9QZR9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a4Q9QZR9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a4Q9QZR9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.5■□□□□ 0.55
Col4a4Q9QZR9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.5■□□□□ 0.55
Col4a4Q9QZR9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a4Q9QZR9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.5■□□□□ 0.55
Col4a4Q9QZR9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a4Q9QZR9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Col4a4Q9QZR9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a4Q9QZR9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a4Q9QZR9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a4Q9QZR9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a4Q9QZR9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a4Q9QZR9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a4Q9QZR9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a4Q9QZR9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a4Q9QZR9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a4Q9QZR9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a4Q9QZR9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a4Q9QZR9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a4Q9QZR9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a4Q9QZR9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a4Q9QZR9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a4Q9QZR9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.48■□□□□ 0.55
Col4a4Q9QZR9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.47■□□□□ 0.55
Col4a4Q9QZR9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Col4a4Q9QZR9 Mir1668-201ENSMUST00000184114 107 ntBASIC18.47■□□□□ 0.55
Col4a4Q9QZR9 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.47■□□□□ 0.55
Col4a4Q9QZR9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Col4a4Q9QZR9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a4Q9QZR9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.47■□□□□ 0.55
Col4a4Q9QZR9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a4Q9QZR9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.47■□□□□ 0.55
Col4a4Q9QZR9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a4Q9QZR9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a4Q9QZR9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a4Q9QZR9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a4Q9QZR9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Col4a4Q9QZR9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a4Q9QZR9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.47■□□□□ 0.55
Col4a4Q9QZR9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a4Q9QZR9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a4Q9QZR9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a4Q9QZR9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a4Q9QZR9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a4Q9QZR9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a4Q9QZR9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col4a4Q9QZR9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a4Q9QZR9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a4Q9QZR9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.45■□□□□ 0.54
Col4a4Q9QZR9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.45■□□□□ 0.54
Col4a4Q9QZR9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a4Q9QZR9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a4Q9QZR9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a4Q9QZR9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Col4a4Q9QZR9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col4a4Q9QZR9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a4Q9QZR9 Gm24589-201ENSMUST00000116692 94 ntBASIC18.44■□□□□ 0.54
Col4a4Q9QZR9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.44■□□□□ 0.54
Col4a4Q9QZR9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.44■□□□□ 0.54
Col4a4Q9QZR9 Gm4974-201ENSMUST00000209974 875 ntBASIC18.44■□□□□ 0.54
Col4a4Q9QZR9 Gm7791-201ENSMUST00000219066 539 ntBASIC18.44■□□□□ 0.54
Col4a4Q9QZR9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a4Q9QZR9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a4Q9QZR9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Col4a4Q9QZR9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a4Q9QZR9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a4Q9QZR9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a4Q9QZR9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.44■□□□□ 0.54
Col4a4Q9QZR9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.44■□□□□ 0.54
Col4a4Q9QZR9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a4Q9QZR9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a4Q9QZR9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.43■□□□□ 0.54
Col4a4Q9QZR9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a4Q9QZR9 Gm11950-201ENSMUST00000121615 838 ntBASIC18.43■□□□□ 0.54
Col4a4Q9QZR9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a4Q9QZR9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a4Q9QZR9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a4Q9QZR9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms