Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.67■□□□□ 0.9
Nr2e3Q9QXZ7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.67■□□□□ 0.9
Nr2e3Q9QXZ7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr2e3Q9QXZ7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr2e3Q9QXZ7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Nr2e3Q9QXZ7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Nr2e3Q9QXZ7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr2e3Q9QXZ7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr2e3Q9QXZ7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr2e3Q9QXZ7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr2e3Q9QXZ7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr2e3Q9QXZ7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nr2e3Q9QXZ7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nr2e3Q9QXZ7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nr2e3Q9QXZ7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.66■□□□□ 0.9
Nr2e3Q9QXZ7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nr2e3Q9QXZ7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nr2e3Q9QXZ7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nr2e3Q9QXZ7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nr2e3Q9QXZ7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nr2e3Q9QXZ7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nr2e3Q9QXZ7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nr2e3Q9QXZ7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nr2e3Q9QXZ7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nr2e3Q9QXZ7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nr2e3Q9QXZ7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.65■□□□□ 0.9
Nr2e3Q9QXZ7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nr2e3Q9QXZ7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Nr2e3Q9QXZ7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nr2e3Q9QXZ7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nr2e3Q9QXZ7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nr2e3Q9QXZ7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nr2e3Q9QXZ7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nr2e3Q9QXZ7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nr2e3Q9QXZ7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.64■□□□□ 0.89
Nr2e3Q9QXZ7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nr2e3Q9QXZ7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Nr2e3Q9QXZ7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Nr2e3Q9QXZ7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nr2e3Q9QXZ7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nr2e3Q9QXZ7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nr2e3Q9QXZ7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nr2e3Q9QXZ7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nr2e3Q9QXZ7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Nr2e3Q9QXZ7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.63■□□□□ 0.89
Nr2e3Q9QXZ7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nr2e3Q9QXZ7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.63■□□□□ 0.89
Nr2e3Q9QXZ7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nr2e3Q9QXZ7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Nr2e3Q9QXZ7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nr2e3Q9QXZ7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nr2e3Q9QXZ7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nr2e3Q9QXZ7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nr2e3Q9QXZ7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nr2e3Q9QXZ7 Gm2399-201ENSMUST00000104944 225 ntBASIC20.62■□□□□ 0.89
Nr2e3Q9QXZ7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nr2e3Q9QXZ7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nr2e3Q9QXZ7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nr2e3Q9QXZ7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.62■□□□□ 0.89
Nr2e3Q9QXZ7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.62■□□□□ 0.89
Nr2e3Q9QXZ7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nr2e3Q9QXZ7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.61■□□□□ 0.89
Nr2e3Q9QXZ7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nr2e3Q9QXZ7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nr2e3Q9QXZ7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.61■□□□□ 0.89
Nr2e3Q9QXZ7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nr2e3Q9QXZ7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nr2e3Q9QXZ7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nr2e3Q9QXZ7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Nr2e3Q9QXZ7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.61■□□□□ 0.89
Nr2e3Q9QXZ7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.61■□□□□ 0.89
Nr2e3Q9QXZ7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.61■□□□□ 0.89
Nr2e3Q9QXZ7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nr2e3Q9QXZ7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nr2e3Q9QXZ7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nr2e3Q9QXZ7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nr2e3Q9QXZ7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr2e3Q9QXZ7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Nr2e3Q9QXZ7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.6■□□□□ 0.89
Nr2e3Q9QXZ7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.6■□□□□ 0.89
Nr2e3Q9QXZ7 Gm12527-201ENSMUST00000117967 564 ntBASIC20.6■□□□□ 0.89
Nr2e3Q9QXZ7 Gm20049-201ENSMUST00000219950 730 ntBASIC20.6■□□□□ 0.89
Nr2e3Q9QXZ7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr2e3Q9QXZ7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr2e3Q9QXZ7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.6■□□□□ 0.89
Nr2e3Q9QXZ7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr2e3Q9QXZ7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr2e3Q9QXZ7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nr2e3Q9QXZ7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.59■□□□□ 0.89
Nr2e3Q9QXZ7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nr2e3Q9QXZ7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Nr2e3Q9QXZ7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nr2e3Q9QXZ7 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.59■□□□□ 0.89
Nr2e3Q9QXZ7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nr2e3Q9QXZ7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.59■□□□□ 0.89
Nr2e3Q9QXZ7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nr2e3Q9QXZ7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.59■□□□□ 0.89
Nr2e3Q9QXZ7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nr2e3Q9QXZ7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nr2e3Q9QXZ7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms