Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a2Q9JLR1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a2Q9JLR1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a2Q9JLR1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.43■□□□□ 0.22
Sec61a2Q9JLR1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a2Q9JLR1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a2Q9JLR1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a2Q9JLR1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a2Q9JLR1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.43■□□□□ 0.22
Sec61a2Q9JLR1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a2Q9JLR1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a2Q9JLR1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a2Q9JLR1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a2Q9JLR1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.43■□□□□ 0.22
Sec61a2Q9JLR1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a2Q9JLR1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sec61a2Q9JLR1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sec61a2Q9JLR1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a2Q9JLR1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a2Q9JLR1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a2Q9JLR1 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.42■□□□□ 0.22
Sec61a2Q9JLR1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a2Q9JLR1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a2Q9JLR1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Sec61a2Q9JLR1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a2Q9JLR1 Gm13146-201ENSMUST00000118508 780 ntBASIC16.42■□□□□ 0.22
Sec61a2Q9JLR1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.42■□□□□ 0.22
Sec61a2Q9JLR1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Sec61a2Q9JLR1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a2Q9JLR1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a2Q9JLR1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Sec61a2Q9JLR1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Sec61a2Q9JLR1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sec61a2Q9JLR1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sec61a2Q9JLR1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a2Q9JLR1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Sec61a2Q9JLR1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Sec61a2Q9JLR1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a2Q9JLR1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a2Q9JLR1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a2Q9JLR1 Gm37179-201ENSMUST00000194862 823 ntBASIC16.39■□□□□ 0.21
Sec61a2Q9JLR1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.39■□□□□ 0.21
Sec61a2Q9JLR1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a2Q9JLR1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a2Q9JLR1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.39■□□□□ 0.21
Sec61a2Q9JLR1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a2Q9JLR1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a2Q9JLR1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a2Q9JLR1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a2Q9JLR1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms