Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Scn5aQ9JJV9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn5aQ9JJV9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn5aQ9JJV9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn5aQ9JJV9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn5aQ9JJV9 Gm12085-201ENSMUST00000119263 940 ntBASIC18.97■□□□□ 0.63
Scn5aQ9JJV9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn5aQ9JJV9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn5aQ9JJV9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Scn5aQ9JJV9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Scn5aQ9JJV9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.96■□□□□ 0.63
Scn5aQ9JJV9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn5aQ9JJV9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.96■□□□□ 0.63
Scn5aQ9JJV9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn5aQ9JJV9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn5aQ9JJV9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn5aQ9JJV9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Scn5aQ9JJV9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn5aQ9JJV9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn5aQ9JJV9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn5aQ9JJV9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.96■□□□□ 0.63
Scn5aQ9JJV9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Gm18959-201ENSMUST00000208954 655 ntBASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.95■□□□□ 0.62
Scn5aQ9JJV9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn5aQ9JJV9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn5aQ9JJV9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Scn5aQ9JJV9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn5aQ9JJV9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.94■□□□□ 0.62
Scn5aQ9JJV9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn5aQ9JJV9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Scn5aQ9JJV9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Scn5aQ9JJV9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn5aQ9JJV9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn5aQ9JJV9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Scn5aQ9JJV9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scn5aQ9JJV9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn5aQ9JJV9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn5aQ9JJV9 Gm23634-201ENSMUST00000175071 91 ntBASIC18.92■□□□□ 0.62
Scn5aQ9JJV9 Gm21362-201ENSMUST00000194272 928 ntBASIC18.92■□□□□ 0.62
Scn5aQ9JJV9 Gm18032-201ENSMUST00000222541 538 ntBASIC18.92■□□□□ 0.62
Scn5aQ9JJV9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn5aQ9JJV9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Scn5aQ9JJV9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn5aQ9JJV9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn5aQ9JJV9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.91■□□□□ 0.62
Scn5aQ9JJV9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scn5aQ9JJV9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn5aQ9JJV9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn5aQ9JJV9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn5aQ9JJV9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn5aQ9JJV9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn5aQ9JJV9 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.91■□□□□ 0.62
Scn5aQ9JJV9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scn5aQ9JJV9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn5aQ9JJV9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Scn5aQ9JJV9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn5aQ9JJV9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn5aQ9JJV9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Scn5aQ9JJV9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn5aQ9JJV9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn5aQ9JJV9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn5aQ9JJV9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn5aQ9JJV9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scn5aQ9JJV9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn5aQ9JJV9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.9■□□□□ 0.62
Scn5aQ9JJV9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn5aQ9JJV9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.9■□□□□ 0.62
Scn5aQ9JJV9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Scn5aQ9JJV9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Scn5aQ9JJV9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.9■□□□□ 0.62
Scn5aQ9JJV9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn5aQ9JJV9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn5aQ9JJV9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn5aQ9JJV9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn5aQ9JJV9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn5aQ9JJV9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Scn5aQ9JJV9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Scn5aQ9JJV9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn5aQ9JJV9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scn5aQ9JJV9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn5aQ9JJV9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms