Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Copb1Q9JIF7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Copb1Q9JIF7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Copb1Q9JIF7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Copb1Q9JIF7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Copb1Q9JIF7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Copb1Q9JIF7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Copb1Q9JIF7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Copb1Q9JIF7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Copb1Q9JIF7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Copb1Q9JIF7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Copb1Q9JIF7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Copb1Q9JIF7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Copb1Q9JIF7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Copb1Q9JIF7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Copb1Q9JIF7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Copb1Q9JIF7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Copb1Q9JIF7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Copb1Q9JIF7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Copb1Q9JIF7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Copb1Q9JIF7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Copb1Q9JIF7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Copb1Q9JIF7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Copb1Q9JIF7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Copb1Q9JIF7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Copb1Q9JIF7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Copb1Q9JIF7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Copb1Q9JIF7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Copb1Q9JIF7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Copb1Q9JIF7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.97■□□□□ 0.79
Copb1Q9JIF7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.97■□□□□ 0.79
Copb1Q9JIF7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Copb1Q9JIF7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Copb1Q9JIF7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Copb1Q9JIF7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Copb1Q9JIF7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Copb1Q9JIF7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Copb1Q9JIF7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Copb1Q9JIF7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Copb1Q9JIF7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Copb1Q9JIF7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Copb1Q9JIF7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Copb1Q9JIF7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Copb1Q9JIF7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Copb1Q9JIF7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Copb1Q9JIF7 Tgds-204ENSMUST00000228543 1594 ntBASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Copb1Q9JIF7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Copb1Q9JIF7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Copb1Q9JIF7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Copb1Q9JIF7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Copb1Q9JIF7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Copb1Q9JIF7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Copb1Q9JIF7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Copb1Q9JIF7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Copb1Q9JIF7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Copb1Q9JIF7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Copb1Q9JIF7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Copb1Q9JIF7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Copb1Q9JIF7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Copb1Q9JIF7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Copb1Q9JIF7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Copb1Q9JIF7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Copb1Q9JIF7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Copb1Q9JIF7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Copb1Q9JIF7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Copb1Q9JIF7 Gm13234-201ENSMUST00000120010 747 ntBASIC19.93■□□□□ 0.78
Copb1Q9JIF7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.93■□□□□ 0.78
Copb1Q9JIF7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.93■□□□□ 0.78
Copb1Q9JIF7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Copb1Q9JIF7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.93■□□□□ 0.78
Copb1Q9JIF7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.93■□□□□ 0.78
Copb1Q9JIF7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Copb1Q9JIF7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Copb1Q9JIF7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Copb1Q9JIF7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Copb1Q9JIF7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Copb1Q9JIF7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Copb1Q9JIF7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Copb1Q9JIF7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Copb1Q9JIF7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Copb1Q9JIF7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Copb1Q9JIF7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Copb1Q9JIF7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms