Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Mbd3l1Q9D9H3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Mbd3l1Q9D9H3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mbd3l1Q9D9H3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mbd3l1Q9D9H3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mbd3l1Q9D9H3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mbd3l1Q9D9H3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mbd3l1Q9D9H3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mbd3l1Q9D9H3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mbd3l1Q9D9H3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Mbd3l1Q9D9H3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mbd3l1Q9D9H3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mbd3l1Q9D9H3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mbd3l1Q9D9H3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mbd3l1Q9D9H3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Mbd3l1Q9D9H3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Mbd3l1Q9D9H3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Mbd3l1Q9D9H3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Mbd3l1Q9D9H3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mbd3l1Q9D9H3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mbd3l1Q9D9H3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Mbd3l1Q9D9H3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.83■□□□□ 0.12
Mbd3l1Q9D9H3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mbd3l1Q9D9H3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mbd3l1Q9D9H3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
Mbd3l1Q9D9H3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mbd3l1Q9D9H3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Mbd3l1Q9D9H3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mbd3l1Q9D9H3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mbd3l1Q9D9H3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mbd3l1Q9D9H3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mbd3l1Q9D9H3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Mbd3l1Q9D9H3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mbd3l1Q9D9H3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Mbd3l1Q9D9H3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mbd3l1Q9D9H3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mbd3l1Q9D9H3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mbd3l1Q9D9H3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mbd3l1Q9D9H3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.82■□□□□ 0.12
Mbd3l1Q9D9H3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mbd3l1Q9D9H3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mbd3l1Q9D9H3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mbd3l1Q9D9H3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Mbd3l1Q9D9H3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mbd3l1Q9D9H3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mbd3l1Q9D9H3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mbd3l1Q9D9H3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mbd3l1Q9D9H3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.81■□□□□ 0.12
Mbd3l1Q9D9H3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Mbd3l1Q9D9H3 Gm7143-201ENSMUST00000222811 859 ntBASIC15.81■□□□□ 0.12
Mbd3l1Q9D9H3 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.81■□□□□ 0.12
Mbd3l1Q9D9H3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mbd3l1Q9D9H3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mbd3l1Q9D9H3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mbd3l1Q9D9H3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mbd3l1Q9D9H3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mbd3l1Q9D9H3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC15.81■□□□□ 0.12
Mbd3l1Q9D9H3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Mbd3l1Q9D9H3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mbd3l1Q9D9H3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mbd3l1Q9D9H3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Mbd3l1Q9D9H3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mbd3l1Q9D9H3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Mbd3l1Q9D9H3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms