Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Gtf3c6Q9D8P7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gtf3c6Q9D8P7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gtf3c6Q9D8P7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gtf3c6Q9D8P7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gtf3c6Q9D8P7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gtf3c6Q9D8P7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Gtf3c6Q9D8P7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c6Q9D8P7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c6Q9D8P7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.44■□□□□ 0.7
Gtf3c6Q9D8P7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c6Q9D8P7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c6Q9D8P7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c6Q9D8P7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.44■□□□□ 0.7
Gtf3c6Q9D8P7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c6Q9D8P7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.44■□□□□ 0.7
Gtf3c6Q9D8P7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gtf3c6Q9D8P7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gtf3c6Q9D8P7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.43■□□□□ 0.7
Gtf3c6Q9D8P7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Gtf3c6Q9D8P7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c6Q9D8P7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Gtf3c6Q9D8P7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c6Q9D8P7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Gtf3c6Q9D8P7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c6Q9D8P7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c6Q9D8P7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c6Q9D8P7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c6Q9D8P7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gtf3c6Q9D8P7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Gtf3c6Q9D8P7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c6Q9D8P7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c6Q9D8P7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.42■□□□□ 0.7
Gtf3c6Q9D8P7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c6Q9D8P7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c6Q9D8P7 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.42■□□□□ 0.7
Gtf3c6Q9D8P7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c6Q9D8P7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c6Q9D8P7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c6Q9D8P7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c6Q9D8P7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gtf3c6Q9D8P7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Tgds-204ENSMUST00000228543 1594 ntBASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Gm7290-201ENSMUST00000104990 617 ntBASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Gm12918-201ENSMUST00000120234 636 ntBASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Gm15710-201ENSMUST00000121821 636 ntBASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Gm5075-201ENSMUST00000196916 622 ntBASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gtf3c6Q9D8P7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 Grk6-206ENSMUST00000224995 2971 ntBASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gtf3c6Q9D8P7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms