Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nop56Q9D6Z1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nop56Q9D6Z1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.81■□□□□ 0.6
Nop56Q9D6Z1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop56Q9D6Z1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop56Q9D6Z1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop56Q9D6Z1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nop56Q9D6Z1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop56Q9D6Z1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nop56Q9D6Z1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop56Q9D6Z1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop56Q9D6Z1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nop56Q9D6Z1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nop56Q9D6Z1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nop56Q9D6Z1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nop56Q9D6Z1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nop56Q9D6Z1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.8■□□□□ 0.6
Nop56Q9D6Z1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.8■□□□□ 0.6
Nop56Q9D6Z1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nop56Q9D6Z1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nop56Q9D6Z1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nop56Q9D6Z1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nop56Q9D6Z1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nop56Q9D6Z1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nop56Q9D6Z1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nop56Q9D6Z1 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.8■□□□□ 0.6
Nop56Q9D6Z1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.8■□□□□ 0.6
Nop56Q9D6Z1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nop56Q9D6Z1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nop56Q9D6Z1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Nop56Q9D6Z1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop56Q9D6Z1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.79■□□□□ 0.6
Nop56Q9D6Z1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nop56Q9D6Z1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop56Q9D6Z1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop56Q9D6Z1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop56Q9D6Z1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop56Q9D6Z1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Nop56Q9D6Z1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nop56Q9D6Z1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop56Q9D6Z1 Gm43137-201ENSMUST00000198052 594 ntBASIC18.79■□□□□ 0.6
Nop56Q9D6Z1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop56Q9D6Z1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nop56Q9D6Z1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop56Q9D6Z1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop56Q9D6Z1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nop56Q9D6Z1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nop56Q9D6Z1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nop56Q9D6Z1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nop56Q9D6Z1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nop56Q9D6Z1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nop56Q9D6Z1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nop56Q9D6Z1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.6
Nop56Q9D6Z1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nop56Q9D6Z1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.77■□□□□ 0.6
Nop56Q9D6Z1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Nop56Q9D6Z1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nop56Q9D6Z1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nop56Q9D6Z1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nop56Q9D6Z1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nop56Q9D6Z1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.77■□□□□ 0.59
Nop56Q9D6Z1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nop56Q9D6Z1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
Nop56Q9D6Z1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nop56Q9D6Z1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nop56Q9D6Z1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nop56Q9D6Z1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop56Q9D6Z1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop56Q9D6Z1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop56Q9D6Z1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop56Q9D6Z1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nop56Q9D6Z1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms