Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3404Q9D506 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.42■□□□□ 0.7
Gm3404Q9D506 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3404Q9D506 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3404Q9D506 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gm3404Q9D506 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.42■□□□□ 0.7
Gm3404Q9D506 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3404Q9D506 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3404Q9D506 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3404Q9D506 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3404Q9D506 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Gm3404Q9D506 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Gm3404Q9D506 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3404Q9D506 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3404Q9D506 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.41■□□□□ 0.7
Gm3404Q9D506 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gm3404Q9D506 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3404Q9D506 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.41■□□□□ 0.7
Gm3404Q9D506 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.41■□□□□ 0.7
Gm3404Q9D506 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3404Q9D506 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3404Q9D506 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3404Q9D506 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3404Q9D506 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3404Q9D506 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.4■□□□□ 0.7
Gm3404Q9D506 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3404Q9D506 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.4■□□□□ 0.7
Gm3404Q9D506 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.4■□□□□ 0.7
Gm3404Q9D506 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3404Q9D506 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3404Q9D506 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gm3404Q9D506 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gm3404Q9D506 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Gm3404Q9D506 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3404Q9D506 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3404Q9D506 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm3404Q9D506 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm3404Q9D506 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3404Q9D506 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Gm3404Q9D506 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3404Q9D506 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3404Q9D506 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.39■□□□□ 0.69
Gm3404Q9D506 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3404Q9D506 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3404Q9D506 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3404Q9D506 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3404Q9D506 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm3404Q9D506 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Gm3404Q9D506 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3404Q9D506 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3404Q9D506 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.38■□□□□ 0.69
Gm3404Q9D506 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3404Q9D506 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3404Q9D506 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3404Q9D506 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm3404Q9D506 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Gm3404Q9D506 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3404Q9D506 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3404Q9D506 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3404Q9D506 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.37■□□□□ 0.69
Gm3404Q9D506 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.37■□□□□ 0.69
Gm3404Q9D506 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3404Q9D506 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.37■□□□□ 0.69
Gm3404Q9D506 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.37■□□□□ 0.69
Gm3404Q9D506 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3404Q9D506 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3404Q9D506 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Gm3404Q9D506 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm3404Q9D506 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3404Q9D506 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3404Q9D506 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3404Q9D506 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Gm3404Q9D506 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3404Q9D506 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3404Q9D506 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.36■□□□□ 0.69
Gm3404Q9D506 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3404Q9D506 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3404Q9D506 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3404Q9D506 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3404Q9D506 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.36■□□□□ 0.69
Gm3404Q9D506 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm3404Q9D506 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Gm3404Q9D506 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3404Q9D506 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3404Q9D506 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gm3404Q9D506 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3404Q9D506 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gm3404Q9D506 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3404Q9D506 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3404Q9D506 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3404Q9D506 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3404Q9D506 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gm3404Q9D506 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3404Q9D506 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3404Q9D506 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3404Q9D506 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm3404Q9D506 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.35■□□□□ 0.69
Gm3404Q9D506 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm3404Q9D506 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Gm3404Q9D506 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms