Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim13Q9CYB0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim13Q9CYB0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim13Q9CYB0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim13Q9CYB0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim13Q9CYB0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim13Q9CYB0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim13Q9CYB0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim13Q9CYB0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim13Q9CYB0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim13Q9CYB0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim13Q9CYB0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim13Q9CYB0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Trim13Q9CYB0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim13Q9CYB0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim13Q9CYB0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.87■□□□□ 0.29
Trim13Q9CYB0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim13Q9CYB0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim13Q9CYB0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim13Q9CYB0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim13Q9CYB0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim13Q9CYB0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim13Q9CYB0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim13Q9CYB0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Trim13Q9CYB0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trim13Q9CYB0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim13Q9CYB0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim13Q9CYB0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim13Q9CYB0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim13Q9CYB0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim13Q9CYB0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim13Q9CYB0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim13Q9CYB0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim13Q9CYB0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim13Q9CYB0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim13Q9CYB0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.86■□□□□ 0.29
Trim13Q9CYB0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim13Q9CYB0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim13Q9CYB0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim13Q9CYB0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim13Q9CYB0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.84■□□□□ 0.29
Trim13Q9CYB0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.84■□□□□ 0.29
Trim13Q9CYB0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim13Q9CYB0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim13Q9CYB0 Gm7860-201ENSMUST00000121190 879 ntBASIC16.83■□□□□ 0.28
Trim13Q9CYB0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim13Q9CYB0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim13Q9CYB0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim13Q9CYB0 Gm21956-201ENSMUST00000179946 522 ntBASIC16.83■□□□□ 0.28
Trim13Q9CYB0 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.83■□□□□ 0.28
Trim13Q9CYB0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim13Q9CYB0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim13Q9CYB0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim13Q9CYB0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim13Q9CYB0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim13Q9CYB0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim13Q9CYB0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim13Q9CYB0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim13Q9CYB0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim13Q9CYB0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim13Q9CYB0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms